Hb_052186_010

Information

Type -
Description -
Location Contig52186: 321-908
Sequence    

Annotation

kegg
ID rcu:RCOM_1075040
description Early nodulin 16 precursor, putative
nr
ID KDP30273.1
description hypothetical protein JCGZ_17055 [Jatropha curcas]
swissprot
ID Q9SK27
description Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060 PE=1 SV=2
trembl
ID A0A067K5J2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17055 PE=4 SV=1
Gene Ontology
ID GO:0009055
description blue copper

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_052186_010 0.0 - - hypothetical protein JCGZ_17055 [Jatropha curcas]
2 Hb_011552_020 0.0954529332 - - hypothetical protein F383_28301 [Gossypium arboreum]
3 Hb_001761_040 0.1271365526 - - PREDICTED: beta-amyrin synthase-like [Jatropha curcas]
4 Hb_132270_010 0.1386112202 - - hypothetical protein JCGZ_25438 [Jatropha curcas]
5 Hb_008503_020 0.1453820601 - - transferase, transferring glycosyl groups, putative [Ricinus communis]
6 Hb_001864_010 0.1499012139 - - conserved hypothetical protein [Ricinus communis]
7 Hb_151364_010 0.149905567 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
8 Hb_008053_070 0.1575556371 - - PREDICTED: U-box domain-containing protein 33-like isoform X4 [Jatropha curcas]
9 Hb_004162_040 0.1586205891 - - PREDICTED: lysosomal Pro-X carboxypeptidase-like [Crassostrea gigas]
10 Hb_005436_020 0.1615207674 - - UDP-glucosyltransferase, putative [Ricinus communis]
11 Hb_169388_010 0.1633569457 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
12 Hb_032215_070 0.1759316408 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
13 Hb_001427_130 0.1759621311 - - PREDICTED: uncharacterized protein LOC101510272 [Cicer arietinum]
14 Hb_003010_060 0.1763257199 - - Patatin T5 precursor, putative [Ricinus communis]
15 Hb_008052_020 0.1765626568 - - PREDICTED: proline-rich receptor-like protein kinase PERK15 [Brassica rapa]
16 Hb_008214_010 0.1766062986 - - PREDICTED: uncharacterized protein LOC105797726 [Gossypium raimondii]
17 Hb_002005_010 0.1770880946 transcription factor TF Family: MYB PREDICTED: transcription factor MYB39-like isoform X2 [Populus euphratica]
18 Hb_013654_010 0.179270661 - - unnamed protein product [Vitis vinifera]
19 Hb_001709_070 0.1794869044 - - carbohydrate binding protein, putative [Ricinus communis]
20 Hb_010839_020 0.1797850837 - - -

Gene co-expression network

sample Hb_052186_010 Hb_052186_010 Hb_011552_020 Hb_011552_020 Hb_052186_010--Hb_011552_020 Hb_001761_040 Hb_001761_040 Hb_052186_010--Hb_001761_040 Hb_132270_010 Hb_132270_010 Hb_052186_010--Hb_132270_010 Hb_008503_020 Hb_008503_020 Hb_052186_010--Hb_008503_020 Hb_001864_010 Hb_001864_010 Hb_052186_010--Hb_001864_010 Hb_151364_010 Hb_151364_010 Hb_052186_010--Hb_151364_010 Hb_006475_020 Hb_006475_020 Hb_011552_020--Hb_006475_020 Hb_108884_020 Hb_108884_020 Hb_011552_020--Hb_108884_020 Hb_020581_050 Hb_020581_050 Hb_011552_020--Hb_020581_050 Hb_011552_020--Hb_001864_010 Hb_005436_020 Hb_005436_020 Hb_011552_020--Hb_005436_020 Hb_004619_010 Hb_004619_010 Hb_001761_040--Hb_004619_010 Hb_008053_070 Hb_008053_070 Hb_001761_040--Hb_008053_070 Hb_007666_040 Hb_007666_040 Hb_001761_040--Hb_007666_040 Hb_032651_060 Hb_032651_060 Hb_001761_040--Hb_032651_060 Hb_001761_040--Hb_151364_010 Hb_004195_050 Hb_004195_050 Hb_132270_010--Hb_004195_050 Hb_007382_060 Hb_007382_060 Hb_132270_010--Hb_007382_060 Hb_000000_220 Hb_000000_220 Hb_132270_010--Hb_000000_220 Hb_007658_020 Hb_007658_020 Hb_132270_010--Hb_007658_020 Hb_151236_010 Hb_151236_010 Hb_132270_010--Hb_151236_010 Hb_001168_080 Hb_001168_080 Hb_132270_010--Hb_001168_080 Hb_001489_030 Hb_001489_030 Hb_008503_020--Hb_001489_030 Hb_001709_070 Hb_001709_070 Hb_008503_020--Hb_001709_070 Hb_003086_200 Hb_003086_200 Hb_008503_020--Hb_003086_200 Hb_012053_030 Hb_012053_030 Hb_008503_020--Hb_012053_030 Hb_008503_020--Hb_001864_010 Hb_008503_020--Hb_008053_070 Hb_005797_030 Hb_005797_030 Hb_001864_010--Hb_005797_030 Hb_029508_030 Hb_029508_030 Hb_001864_010--Hb_029508_030 Hb_002007_230 Hb_002007_230 Hb_001864_010--Hb_002007_230 Hb_000221_170 Hb_000221_170 Hb_001864_010--Hb_000221_170 Hb_000286_190 Hb_000286_190 Hb_001864_010--Hb_000286_190 Hb_005489_160 Hb_005489_160 Hb_151364_010--Hb_005489_160 Hb_151364_010--Hb_008053_070 Hb_000300_570 Hb_000300_570 Hb_151364_010--Hb_000300_570 Hb_151364_010--Hb_012053_030 Hb_151364_010--Hb_005797_030 Hb_151364_010--Hb_002007_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.50985 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.76236 0.210865

CAGE analysis