Hb_151694_010

Information

Type -
Description -
Location Contig151694: 432-1818
Sequence    

Annotation

kegg
ID rcu:RCOM_0786450
description Polygalacturonase non-catalytic subunit AroGP2 precursor, putative
nr
ID XP_012090065.1
description PREDICTED: BURP domain-containing protein 17-like isoform X2 [Jatropha curcas]
swissprot
ID Q942D4
description BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=BURP3 PE=2 SV=1
trembl
ID A0A067LAS7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17183 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12872: 510-1234
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_151694_010 0.0 - - PREDICTED: BURP domain-containing protein 17-like isoform X2 [Jatropha curcas]
2 Hb_002142_010 0.0581502071 - - conserved hypothetical protein [Ricinus communis]
3 Hb_007709_020 0.0806980491 - - PREDICTED: uncharacterized protein LOC105049010 [Elaeis guineensis]
4 Hb_028872_040 0.1058615236 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
5 Hb_044313_010 0.146767487 - - conserved hypothetical protein [Ricinus communis]
6 Hb_138667_010 0.1539427848 - - hypothetical protein JCGZ_04974 [Jatropha curcas]
7 Hb_004021_120 0.1674032067 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
8 Hb_000280_120 0.1763237404 - - PREDICTED: uncharacterized protein LOC105643934 [Jatropha curcas]
9 Hb_167020_010 0.1805579235 - - unnamed protein product [Vitis vinifera]
10 Hb_005081_090 0.1812579856 - - -
11 Hb_038190_030 0.1829836247 - - -
12 Hb_003469_010 0.1835597877 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Jatropha curcas]
13 Hb_006475_020 0.1887038127 - - PREDICTED: probable L-type lectin-domain containing receptor kinase S.5 [Jatropha curcas]
14 Hb_032299_070 0.1889237451 - - -
15 Hb_003938_100 0.1915391839 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000243_050 0.1922014156 - - ADP-ribosylation factor, putative [Ricinus communis]
17 Hb_002585_060 0.2000061777 - - PREDICTED: uncharacterized protein LOC104899128, partial [Beta vulgaris subsp. vulgaris]
18 Hb_022108_010 0.2016888679 - - G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Glycine soja]
19 Hb_011242_070 0.2057805553 - - beta-cyanoalanine synthase [Hevea brasiliensis]
20 Hb_011174_100 0.2062663934 - - ubiquitin-protein ligase, putative [Ricinus communis]

Gene co-expression network

sample Hb_151694_010 Hb_151694_010 Hb_002142_010 Hb_002142_010 Hb_151694_010--Hb_002142_010 Hb_007709_020 Hb_007709_020 Hb_151694_010--Hb_007709_020 Hb_028872_040 Hb_028872_040 Hb_151694_010--Hb_028872_040 Hb_044313_010 Hb_044313_010 Hb_151694_010--Hb_044313_010 Hb_138667_010 Hb_138667_010 Hb_151694_010--Hb_138667_010 Hb_004021_120 Hb_004021_120 Hb_151694_010--Hb_004021_120 Hb_002142_010--Hb_007709_020 Hb_002142_010--Hb_028872_040 Hb_002142_010--Hb_044313_010 Hb_002142_010--Hb_138667_010 Hb_000280_120 Hb_000280_120 Hb_002142_010--Hb_000280_120 Hb_007709_020--Hb_028872_040 Hb_007709_020--Hb_138667_010 Hb_007709_020--Hb_000280_120 Hb_003938_100 Hb_003938_100 Hb_007709_020--Hb_003938_100 Hb_028872_040--Hb_138667_010 Hb_028872_040--Hb_000280_120 Hb_000243_050 Hb_000243_050 Hb_028872_040--Hb_000243_050 Hb_028872_040--Hb_003938_100 Hb_006475_020 Hb_006475_020 Hb_044313_010--Hb_006475_020 Hb_032299_070 Hb_032299_070 Hb_044313_010--Hb_032299_070 Hb_000959_370 Hb_000959_370 Hb_044313_010--Hb_000959_370 Hb_044313_010--Hb_028872_040 Hb_138667_010--Hb_000280_120 Hb_138667_010--Hb_000243_050 Hb_138667_010--Hb_003938_100 Hb_168909_010 Hb_168909_010 Hb_138667_010--Hb_168909_010 Hb_167020_010 Hb_167020_010 Hb_004021_120--Hb_167020_010 Hb_003442_120 Hb_003442_120 Hb_004021_120--Hb_003442_120 Hb_003727_060 Hb_003727_060 Hb_004021_120--Hb_003727_060 Hb_118046_010 Hb_118046_010 Hb_004021_120--Hb_118046_010 Hb_004063_010 Hb_004063_010 Hb_004021_120--Hb_004063_010 Hb_002585_060 Hb_002585_060 Hb_004021_120--Hb_002585_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.495891 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.339062 0.2576

CAGE analysis