Hb_018563_040

Information

Type -
Description -
Location Contig18563: 56070-57752
Sequence    

Annotation

kegg
ID rcu:RCOM_0191610
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative (EC:2.7.11.26)
nr
ID XP_002532358.1
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
swissprot
ID Q39202
description G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana GN=RLK1 PE=2 SV=2
trembl
ID B9T289
description Serine/threonine-protein kinase OS=Ricinus communis GN=RCOM_0191610 PE=3 SV=1
Gene Ontology
ID GO:0004672
description g-type lectin s-receptor-like serine threonine-protein kinase rlk1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_18193: 56770-57241
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_018563_040 0.0 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
2 Hb_001454_160 0.1014079339 - - PREDICTED: translocase of chloroplast 159, chloroplastic [Jatropha curcas]
3 Hb_002555_020 0.1122592762 - - Receptor-like protein kinase [Medicago truncatula]
4 Hb_169388_010 0.1139566124 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
5 Hb_151364_010 0.1267280924 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
6 Hb_003385_090 0.1286473616 - - hypothetical protein JCGZ_08917 [Jatropha curcas]
7 Hb_003117_060 0.1301645234 - - PREDICTED: cytochrome P450 83B1-like [Jatropha curcas]
8 Hb_007666_040 0.1307373874 - - PREDICTED: ent-kaur-16-ene synthase, chloroplastic-like [Jatropha curcas]
9 Hb_118777_010 0.130756298 - - leucine-rich repeat-containing protein, putative [Ricinus communis]
10 Hb_000535_030 0.1327863762 - - PREDICTED: premnaspirodiene oxygenase-like [Jatropha curcas]
11 Hb_005489_160 0.1355838985 - - PREDICTED: primary amine oxidase-like [Jatropha curcas]
12 Hb_106969_010 0.1401715188 - - Cytochrome P450 76C4 [Glycine soja]
13 Hb_000976_060 0.1469290686 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
14 Hb_011909_030 0.1484379972 - - hypothetical protein JCGZ_00732 [Jatropha curcas]
15 Hb_001363_010 0.1500821368 - - hypothetical protein CISIN_1g027763mg [Citrus sinensis]
16 Hb_004055_100 0.1516269277 transcription factor TF Family: MYB PREDICTED: transcription factor MYB86 [Jatropha curcas]
17 Hb_135811_020 0.1528225879 - - hypothetical protein JCGZ_19965 [Jatropha curcas]
18 Hb_152718_010 0.1528480492 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Jatropha curcas]
19 Hb_004619_010 0.1538625708 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
20 Hb_001009_110 0.1540228397 - - PREDICTED: uncharacterized protein LOC105640232 [Jatropha curcas]

Gene co-expression network

sample Hb_018563_040 Hb_018563_040 Hb_001454_160 Hb_001454_160 Hb_018563_040--Hb_001454_160 Hb_002555_020 Hb_002555_020 Hb_018563_040--Hb_002555_020 Hb_169388_010 Hb_169388_010 Hb_018563_040--Hb_169388_010 Hb_151364_010 Hb_151364_010 Hb_018563_040--Hb_151364_010 Hb_003385_090 Hb_003385_090 Hb_018563_040--Hb_003385_090 Hb_003117_060 Hb_003117_060 Hb_018563_040--Hb_003117_060 Hb_001454_160--Hb_002555_020 Hb_000976_060 Hb_000976_060 Hb_001454_160--Hb_000976_060 Hb_005542_110 Hb_005542_110 Hb_001454_160--Hb_005542_110 Hb_152718_010 Hb_152718_010 Hb_001454_160--Hb_152718_010 Hb_001489_030 Hb_001489_030 Hb_001454_160--Hb_001489_030 Hb_004195_190 Hb_004195_190 Hb_002555_020--Hb_004195_190 Hb_002555_020--Hb_000976_060 Hb_002555_020--Hb_001489_030 Hb_002555_020--Hb_005542_110 Hb_169388_010--Hb_003385_090 Hb_032651_060 Hb_032651_060 Hb_169388_010--Hb_032651_060 Hb_004619_010 Hb_004619_010 Hb_169388_010--Hb_004619_010 Hb_001363_010 Hb_001363_010 Hb_169388_010--Hb_001363_010 Hb_169388_010--Hb_001454_160 Hb_005489_160 Hb_005489_160 Hb_151364_010--Hb_005489_160 Hb_008053_070 Hb_008053_070 Hb_151364_010--Hb_008053_070 Hb_000300_570 Hb_000300_570 Hb_151364_010--Hb_000300_570 Hb_012053_030 Hb_012053_030 Hb_151364_010--Hb_012053_030 Hb_005797_030 Hb_005797_030 Hb_151364_010--Hb_005797_030 Hb_002007_230 Hb_002007_230 Hb_151364_010--Hb_002007_230 Hb_000535_030 Hb_000535_030 Hb_003385_090--Hb_000535_030 Hb_003385_090--Hb_032651_060 Hb_007666_040 Hb_007666_040 Hb_003385_090--Hb_007666_040 Hb_001080_040 Hb_001080_040 Hb_003385_090--Hb_001080_040 Hb_049562_010 Hb_049562_010 Hb_003385_090--Hb_049562_010 Hb_001114_210 Hb_001114_210 Hb_003385_090--Hb_001114_210 Hb_003117_060--Hb_007666_040 Hb_003636_010 Hb_003636_010 Hb_003117_060--Hb_003636_010 Hb_003117_060--Hb_000535_030 Hb_118777_010 Hb_118777_010 Hb_003117_060--Hb_118777_010 Hb_003117_060--Hb_003385_090 Hb_106969_010 Hb_106969_010 Hb_003117_060--Hb_106969_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 4.97859 0.0730086 0.270758 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0646325 0 3.01402 0.407469

CAGE analysis