Hb_001437_020

Information

Type -
Description -
Location Contig1437: 18663-21236
Sequence    

Annotation

kegg
ID rcu:RCOM_0545200
description hypothetical protein
nr
ID XP_012064768.1
description PREDICTED: uncharacterized protein LOC105628060 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LIF1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05481 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001437_020 0.0 - - PREDICTED: uncharacterized protein LOC105628060 isoform X2 [Jatropha curcas]
2 Hb_000960_070 0.2093948309 - - PREDICTED: uncharacterized protein LOC105049010 [Elaeis guineensis]
3 Hb_002608_020 0.2171945991 transcription factor TF Family: MYB PREDICTED: myb-related protein 305 [Jatropha curcas]
4 Hb_002257_020 0.2805708528 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
5 Hb_126907_010 0.3005961331 - - -
6 Hb_084611_010 0.3015690674 - - PREDICTED: uncharacterized protein LOC104249812 [Nicotiana sylvestris]
7 Hb_000014_140 0.3017200706 - - hypothetical protein PRUPE_ppa021229mg [Prunus persica]
8 Hb_001638_010 0.3035864598 - - -
9 Hb_000117_170 0.3195365895 - - PREDICTED: uncharacterized protein LOC104088736 isoform X2 [Nicotiana tomentosiformis]
10 Hb_000122_240 0.3203076074 - - monovalent cation:proton antiporter, putative [Ricinus communis]
11 Hb_000069_090 0.3243769993 - - neutral/alkaline invertase [Manihot esculenta]
12 Hb_001486_150 0.3329058723 - - -
13 Hb_000849_110 0.3339484463 - - PREDICTED: uncharacterized protein LOC105179663 [Sesamum indicum]
14 Hb_000563_450 0.3364321083 - - PREDICTED: uncharacterized protein LOC103419743 [Malus domestica]
15 Hb_000575_130 0.3366209163 - - PREDICTED: putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g61610 [Populus euphratica]
16 Hb_003849_230 0.336678642 - - PREDICTED: NEP1-interacting protein 2-like [Jatropha curcas]
17 Hb_000486_050 0.3384497036 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
18 Hb_150998_010 0.3392876502 - - PREDICTED: uncharacterized protein LOC105631130 [Jatropha curcas]
19 Hb_000281_170 0.3397415337 - - polyprotein [Citrus endogenous pararetrovirus]
20 Hb_004361_030 0.3400551201 - - PREDICTED: uncharacterized protein LOC104239397 isoform X1 [Nicotiana sylvestris]

Gene co-expression network

sample Hb_001437_020 Hb_001437_020 Hb_000960_070 Hb_000960_070 Hb_001437_020--Hb_000960_070 Hb_002608_020 Hb_002608_020 Hb_001437_020--Hb_002608_020 Hb_002257_020 Hb_002257_020 Hb_001437_020--Hb_002257_020 Hb_126907_010 Hb_126907_010 Hb_001437_020--Hb_126907_010 Hb_084611_010 Hb_084611_010 Hb_001437_020--Hb_084611_010 Hb_000014_140 Hb_000014_140 Hb_001437_020--Hb_000014_140 Hb_000069_090 Hb_000069_090 Hb_000960_070--Hb_000069_090 Hb_001486_150 Hb_001486_150 Hb_000960_070--Hb_001486_150 Hb_000625_110 Hb_000625_110 Hb_000960_070--Hb_000625_110 Hb_000825_040 Hb_000825_040 Hb_000960_070--Hb_000825_040 Hb_006829_050 Hb_006829_050 Hb_000960_070--Hb_006829_050 Hb_002608_020--Hb_002257_020 Hb_000122_240 Hb_000122_240 Hb_002608_020--Hb_000122_240 Hb_114435_010 Hb_114435_010 Hb_002608_020--Hb_114435_010 Hb_001638_010 Hb_001638_010 Hb_002608_020--Hb_001638_010 Hb_122873_010 Hb_122873_010 Hb_002608_020--Hb_122873_010 Hb_002257_020--Hb_114435_010 Hb_002257_020--Hb_122873_010 Hb_002257_020--Hb_000122_240 Hb_038098_010 Hb_038098_010 Hb_002257_020--Hb_038098_010 Hb_126907_010--Hb_084611_010 Hb_000117_170 Hb_000117_170 Hb_126907_010--Hb_000117_170 Hb_000281_170 Hb_000281_170 Hb_126907_010--Hb_000281_170 Hb_000849_110 Hb_000849_110 Hb_126907_010--Hb_000849_110 Hb_046117_040 Hb_046117_040 Hb_126907_010--Hb_046117_040 Hb_150998_010 Hb_150998_010 Hb_126907_010--Hb_150998_010 Hb_084611_010--Hb_000117_170 Hb_084611_010--Hb_000849_110 Hb_084611_010--Hb_000281_170 Hb_084611_010--Hb_046117_040 Hb_002774_130 Hb_002774_130 Hb_084611_010--Hb_002774_130 Hb_008453_070 Hb_008453_070 Hb_000014_140--Hb_008453_070 Hb_005389_010 Hb_005389_010 Hb_000014_140--Hb_005389_010 Hb_189237_010 Hb_189237_010 Hb_000014_140--Hb_189237_010 Hb_001250_120 Hb_001250_120 Hb_000014_140--Hb_001250_120 Hb_050495_010 Hb_050495_010 Hb_000014_140--Hb_050495_010 Hb_001250_110 Hb_001250_110 Hb_000014_140--Hb_001250_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.251955 0 0 0 0.086252
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0632594 0 0.0253375 0

CAGE analysis