Hb_001486_150

Information

Type -
Description -
Location Contig1486: 109854-113231
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001486_150 0.0 - - -
2 Hb_000960_070 0.1975297612 - - PREDICTED: uncharacterized protein LOC105049010 [Elaeis guineensis]
3 Hb_010921_090 0.2196876277 - - hypothetical protein JCGZ_04800 [Jatropha curcas]
4 Hb_000111_300 0.2332190931 - - PREDICTED: uncharacterized protein LOC105631246 [Jatropha curcas]
5 Hb_000069_090 0.2373728203 - - neutral/alkaline invertase [Manihot esculenta]
6 Hb_001863_100 0.250533159 - - conserved hypothetical protein [Ricinus communis]
7 Hb_133636_010 0.2520390266 - - PREDICTED: proline-rich receptor-like protein kinase PERK15 [Brassica rapa]
8 Hb_000625_110 0.255192224 - - PREDICTED: chaperone protein dnaJ 11, chloroplastic [Jatropha curcas]
9 Hb_003299_010 0.258716578 transcription factor TF Family: HB homeobox protein, putative [Ricinus communis]
10 Hb_011861_110 0.2597732312 - - PREDICTED: uncharacterized protein LOC105636580 [Jatropha curcas]
11 Hb_006615_040 0.2607563219 - - monoxygenase, putative [Ricinus communis]
12 Hb_000610_020 0.2625727904 - - unknown [Glycine max]
13 Hb_006501_120 0.2637993906 - - hypothetical protein JCGZ_07378 [Jatropha curcas]
14 Hb_006829_050 0.2672306939 - - receptor serine-threonine protein kinase, putative [Ricinus communis]
15 Hb_003376_340 0.2711132633 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001373_080 0.2745851086 desease resistance Gene Name: NB-ARC leucine-rich repeat-containing protein, putative [Ricinus communis]
17 Hb_000417_290 0.2837840948 - - conserved hypothetical protein [Ricinus communis]
18 Hb_073096_010 0.2846446365 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 45-like [Jatropha curcas]
19 Hb_000260_320 0.2858579698 - - PREDICTED: uncharacterized protein LOC105649058 [Jatropha curcas]
20 Hb_003504_040 0.2881423142 - - PREDICTED: phosphoenolpyruvate carboxylase kinase 2-like [Jatropha curcas]

Gene co-expression network

sample Hb_001486_150 Hb_001486_150 Hb_000960_070 Hb_000960_070 Hb_001486_150--Hb_000960_070 Hb_010921_090 Hb_010921_090 Hb_001486_150--Hb_010921_090 Hb_000111_300 Hb_000111_300 Hb_001486_150--Hb_000111_300 Hb_000069_090 Hb_000069_090 Hb_001486_150--Hb_000069_090 Hb_001863_100 Hb_001863_100 Hb_001486_150--Hb_001863_100 Hb_133636_010 Hb_133636_010 Hb_001486_150--Hb_133636_010 Hb_000960_070--Hb_000069_090 Hb_001437_020 Hb_001437_020 Hb_000960_070--Hb_001437_020 Hb_000625_110 Hb_000625_110 Hb_000960_070--Hb_000625_110 Hb_000825_040 Hb_000825_040 Hb_000960_070--Hb_000825_040 Hb_006829_050 Hb_006829_050 Hb_000960_070--Hb_006829_050 Hb_011861_110 Hb_011861_110 Hb_010921_090--Hb_011861_110 Hb_000610_020 Hb_000610_020 Hb_010921_090--Hb_000610_020 Hb_004007_120 Hb_004007_120 Hb_010921_090--Hb_004007_120 Hb_004162_010 Hb_004162_010 Hb_010921_090--Hb_004162_010 Hb_073096_010 Hb_073096_010 Hb_010921_090--Hb_073096_010 Hb_002301_200 Hb_002301_200 Hb_000111_300--Hb_002301_200 Hb_000417_290 Hb_000417_290 Hb_000111_300--Hb_000417_290 Hb_000111_300--Hb_001863_100 Hb_038758_010 Hb_038758_010 Hb_000111_300--Hb_038758_010 Hb_002217_440 Hb_002217_440 Hb_000111_300--Hb_002217_440 Hb_008616_060 Hb_008616_060 Hb_000111_300--Hb_008616_060 Hb_124302_030 Hb_124302_030 Hb_000069_090--Hb_124302_030 Hb_003175_020 Hb_003175_020 Hb_000069_090--Hb_003175_020 Hb_000699_190 Hb_000699_190 Hb_000069_090--Hb_000699_190 Hb_025194_010 Hb_025194_010 Hb_000069_090--Hb_025194_010 Hb_000333_130 Hb_000333_130 Hb_001863_100--Hb_000333_130 Hb_003938_010 Hb_003938_010 Hb_001863_100--Hb_003938_010 Hb_012055_100 Hb_012055_100 Hb_001863_100--Hb_012055_100 Hb_005081_080 Hb_005081_080 Hb_001863_100--Hb_005081_080 Hb_000703_320 Hb_000703_320 Hb_001863_100--Hb_000703_320 Hb_000260_320 Hb_000260_320 Hb_001863_100--Hb_000260_320 Hb_003299_010 Hb_003299_010 Hb_133636_010--Hb_003299_010 Hb_000844_010 Hb_000844_010 Hb_133636_010--Hb_000844_010 Hb_002783_320 Hb_002783_320 Hb_133636_010--Hb_002783_320 Hb_005157_010 Hb_005157_010 Hb_133636_010--Hb_005157_010 Hb_011909_030 Hb_011909_030 Hb_133636_010--Hb_011909_030 Hb_007773_030 Hb_007773_030 Hb_133636_010--Hb_007773_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.693897 0.0466433 0.064132 0 0.101933
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.104412 0 0.30367 0

CAGE analysis