Hb_058325_010

Information

Type -
Description -
Location Contig58325: 28-379
Sequence    

Annotation

kegg
ID rcu:RCOM_0979730
description Disease resistance protein RFL1, putative (EC:3.1.3.16)
nr
ID XP_002528174.1
description Disease resistance protein RFL1, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SQA5
description Disease resistance protein RFL1, putative OS=Ricinus communis GN=RCOM_0979730 PE=4 SV=1
Gene Ontology
ID GO:0016787
description phosphoprotein phosphatase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_058325_010 0.0 - - Disease resistance protein RFL1, putative [Ricinus communis]
2 Hb_081686_030 0.1831902088 - - hypothetical protein MIMGU_mgv11b016770mg [Erythranthe guttata]
3 Hb_169620_010 0.1932448235 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105647845 [Jatropha curcas]
4 Hb_043939_010 0.2009169256 - - hypothetical protein B456_N011100 [Gossypium raimondii]
5 Hb_000172_010 0.2010050447 - - PREDICTED: uncharacterized protein DDB_G0271670-like isoform X1 [Populus euphratica]
6 Hb_003371_260 0.20112629 - - hypothetical protein EUGRSUZ_B03661 [Eucalyptus grandis]
7 Hb_000984_100 0.203088399 - - receptor protein kinase, putative [Ricinus communis]
8 Hb_066320_010 0.2034494897 - - hypothetical protein VITISV_027639 [Vitis vinifera]
9 Hb_001879_050 0.207576912 - - Disease resistance protein RFL1, putative [Ricinus communis]
10 Hb_000532_130 0.2098161835 - - hypothetical protein [Anabaena sp. PCC 7108]
11 Hb_017417_030 0.2117495465 transcription factor TF Family: bZIP Ocs element-binding factor, putative [Ricinus communis]
12 Hb_000544_020 0.219622472 desease resistance Gene Name: NB-ARC leucine-rich repeat containing protein, putative [Ricinus communis]
13 Hb_014361_130 0.2198938641 - - PREDICTED: uncharacterized protein LOC105639824 [Jatropha curcas]
14 Hb_009786_010 0.2213970072 - - Phosphoprotein phosphatase [Theobroma cacao]
15 Hb_163658_010 0.225235216 - - Disease resistance protein RPS5, putative [Ricinus communis]
16 Hb_006829_050 0.2258256179 - - receptor serine-threonine protein kinase, putative [Ricinus communis]
17 Hb_007618_010 0.2312888505 - - hypothetical protein JCGZ_23475 [Jatropha curcas]
18 Hb_005380_040 0.2315820578 - - hypothetical protein PRUPE_ppa015877mg, partial [Prunus persica]
19 Hb_003176_020 0.2322084035 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Vitis vinifera]
20 Hb_000586_060 0.2344209103 - - PREDICTED: uncharacterized protein DDB_G0271670-like isoform X1 [Populus euphratica]

Gene co-expression network

sample Hb_058325_010 Hb_058325_010 Hb_081686_030 Hb_081686_030 Hb_058325_010--Hb_081686_030 Hb_169620_010 Hb_169620_010 Hb_058325_010--Hb_169620_010 Hb_043939_010 Hb_043939_010 Hb_058325_010--Hb_043939_010 Hb_000172_010 Hb_000172_010 Hb_058325_010--Hb_000172_010 Hb_003371_260 Hb_003371_260 Hb_058325_010--Hb_003371_260 Hb_000984_100 Hb_000984_100 Hb_058325_010--Hb_000984_100 Hb_009786_010 Hb_009786_010 Hb_081686_030--Hb_009786_010 Hb_000625_040 Hb_000625_040 Hb_081686_030--Hb_000625_040 Hb_002820_090 Hb_002820_090 Hb_081686_030--Hb_002820_090 Hb_166155_010 Hb_166155_010 Hb_081686_030--Hb_166155_010 Hb_003176_020 Hb_003176_020 Hb_081686_030--Hb_003176_020 Hb_003376_150 Hb_003376_150 Hb_081686_030--Hb_003376_150 Hb_004648_100 Hb_004648_100 Hb_169620_010--Hb_004648_100 Hb_066320_010 Hb_066320_010 Hb_169620_010--Hb_066320_010 Hb_060909_010 Hb_060909_010 Hb_169620_010--Hb_060909_010 Hb_163658_010 Hb_163658_010 Hb_169620_010--Hb_163658_010 Hb_000544_020 Hb_000544_020 Hb_169620_010--Hb_000544_020 Hb_001408_150 Hb_001408_150 Hb_169620_010--Hb_001408_150 Hb_000563_120 Hb_000563_120 Hb_043939_010--Hb_000563_120 Hb_062229_010 Hb_062229_010 Hb_043939_010--Hb_062229_010 Hb_006615_190 Hb_006615_190 Hb_043939_010--Hb_006615_190 Hb_014361_130 Hb_014361_130 Hb_043939_010--Hb_014361_130 Hb_043939_010--Hb_000172_010 Hb_009247_030 Hb_009247_030 Hb_043939_010--Hb_009247_030 Hb_000579_220 Hb_000579_220 Hb_000172_010--Hb_000579_220 Hb_000172_010--Hb_006615_190 Hb_007237_090 Hb_007237_090 Hb_000172_010--Hb_007237_090 Hb_001879_050 Hb_001879_050 Hb_000172_010--Hb_001879_050 Hb_000072_160 Hb_000072_160 Hb_000172_010--Hb_000072_160 Hb_084127_010 Hb_084127_010 Hb_000172_010--Hb_084127_010 Hb_003371_210 Hb_003371_210 Hb_003371_260--Hb_003371_210 Hb_003371_260--Hb_066320_010 Hb_000431_030 Hb_000431_030 Hb_003371_260--Hb_000431_030 Hb_002239_030 Hb_002239_030 Hb_003371_260--Hb_002239_030 Hb_010381_110 Hb_010381_110 Hb_003371_260--Hb_010381_110 Hb_003371_260--Hb_014361_130 Hb_000984_100--Hb_001879_050 Hb_000984_100--Hb_000544_020 Hb_001608_030 Hb_001608_030 Hb_000984_100--Hb_001608_030 Hb_002571_010 Hb_002571_010 Hb_000984_100--Hb_002571_010 Hb_000984_100--Hb_003371_260 Hb_004466_070 Hb_004466_070 Hb_000984_100--Hb_004466_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.108325 4.59763 0 1.28234 0 0.543828
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.43722 0.679217

CAGE analysis