Hb_006816_490

Information

Type -
Description -
Location Contig6816: 310409-319997
Sequence    

Annotation

kegg
ID rcu:RCOM_1433930
description Pectinesterase precursor, putative (EC:3.1.1.11)
nr
ID XP_012089439.1
description PREDICTED: probable pectinesterase/pectinesterase inhibitor 21 [Jatropha curcas]
swissprot
ID Q8GX86
description Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2
trembl
ID A0A067JV77
description Pectinesterase OS=Jatropha curcas GN=JCGZ_23282 PE=3 SV=1
Gene Ontology
ID GO:0005618
description pectinesterase pectinesterase inhibitor 28

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006816_490 0.0 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 21 [Jatropha curcas]
2 Hb_169893_010 0.1253856898 - - PREDICTED: uncharacterized protein LOC105644112 [Jatropha curcas]
3 Hb_070498_010 0.1277937051 - - receptor kinase, putative [Ricinus communis]
4 Hb_008686_010 0.1307061685 - - conserved hypothetical protein [Ricinus communis]
5 Hb_015048_020 0.1379914665 - - PREDICTED: myb-like protein D [Jatropha curcas]
6 Hb_006196_030 0.139043873 - - PREDICTED: uncharacterized protein LOC105650679 [Jatropha curcas]
7 Hb_002184_080 0.1394424194 - - triacylglycerol lipase, putative [Ricinus communis]
8 Hb_003029_120 0.1420240977 - - PREDICTED: uncharacterized protein LOC105642638 [Jatropha curcas]
9 Hb_002046_130 0.1456396249 - - PREDICTED: UDP-sugar transporter sqv-7-like [Jatropha curcas]
10 Hb_000996_030 0.149018081 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430 isoform X1 [Jatropha curcas]
11 Hb_000453_020 0.1490522368 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
12 Hb_002301_400 0.1527855848 - - structural constituent of cell wall, putative [Ricinus communis]
13 Hb_001195_550 0.1539537457 - - PREDICTED: deSI-like protein At4g17486 isoform X1 [Jatropha curcas]
14 Hb_001794_040 0.1540017389 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH63 isoform X1 [Jatropha curcas]
15 Hb_000465_020 0.1578220976 - - PREDICTED: uncharacterized protein LOC105632280 [Jatropha curcas]
16 Hb_002078_390 0.1578860192 transcription factor TF Family: SBP PREDICTED: squamosa promoter-binding-like protein 2 [Jatropha curcas]
17 Hb_001157_050 0.1580891137 - - cation efflux protein/ zinc transporter, putative [Ricinus communis]
18 Hb_000032_420 0.1598932627 - - PREDICTED: GDSL esterase/lipase At4g10955 [Jatropha curcas]
19 Hb_001366_290 0.1602420105 - - Alpha-expansin 1 precursor, putative [Ricinus communis]
20 Hb_017383_010 0.1604662262 - - PREDICTED: uncharacterized protein LOC105628176 [Jatropha curcas]

Gene co-expression network

sample Hb_006816_490 Hb_006816_490 Hb_169893_010 Hb_169893_010 Hb_006816_490--Hb_169893_010 Hb_070498_010 Hb_070498_010 Hb_006816_490--Hb_070498_010 Hb_008686_010 Hb_008686_010 Hb_006816_490--Hb_008686_010 Hb_015048_020 Hb_015048_020 Hb_006816_490--Hb_015048_020 Hb_006196_030 Hb_006196_030 Hb_006816_490--Hb_006196_030 Hb_002184_080 Hb_002184_080 Hb_006816_490--Hb_002184_080 Hb_169893_010--Hb_008686_010 Hb_001195_550 Hb_001195_550 Hb_169893_010--Hb_001195_550 Hb_169893_010--Hb_070498_010 Hb_002301_400 Hb_002301_400 Hb_169893_010--Hb_002301_400 Hb_003750_120 Hb_003750_120 Hb_169893_010--Hb_003750_120 Hb_128196_010 Hb_128196_010 Hb_169893_010--Hb_128196_010 Hb_070498_010--Hb_128196_010 Hb_070498_010--Hb_002301_400 Hb_000996_030 Hb_000996_030 Hb_070498_010--Hb_000996_030 Hb_012404_020 Hb_012404_020 Hb_070498_010--Hb_012404_020 Hb_011918_070 Hb_011918_070 Hb_070498_010--Hb_011918_070 Hb_000003_750 Hb_000003_750 Hb_070498_010--Hb_000003_750 Hb_005496_040 Hb_005496_040 Hb_008686_010--Hb_005496_040 Hb_008686_010--Hb_001195_550 Hb_008686_010--Hb_070498_010 Hb_008686_010--Hb_000003_750 Hb_143629_120 Hb_143629_120 Hb_008686_010--Hb_143629_120 Hb_001157_050 Hb_001157_050 Hb_015048_020--Hb_001157_050 Hb_000032_420 Hb_000032_420 Hb_015048_020--Hb_000032_420 Hb_010449_010 Hb_010449_010 Hb_015048_020--Hb_010449_010 Hb_001117_050 Hb_001117_050 Hb_015048_020--Hb_001117_050 Hb_000112_080 Hb_000112_080 Hb_015048_020--Hb_000112_080 Hb_015048_020--Hb_000003_750 Hb_001159_090 Hb_001159_090 Hb_006196_030--Hb_001159_090 Hb_002490_060 Hb_002490_060 Hb_006196_030--Hb_002490_060 Hb_000996_070 Hb_000996_070 Hb_006196_030--Hb_000996_070 Hb_006196_030--Hb_002301_400 Hb_001794_040 Hb_001794_040 Hb_006196_030--Hb_001794_040 Hb_007123_010 Hb_007123_010 Hb_006196_030--Hb_007123_010 Hb_000679_250 Hb_000679_250 Hb_002184_080--Hb_000679_250 Hb_002518_220 Hb_002518_220 Hb_002184_080--Hb_002518_220 Hb_002184_080--Hb_169893_010 Hb_000453_020 Hb_000453_020 Hb_002184_080--Hb_000453_020 Hb_035995_010 Hb_035995_010 Hb_002184_080--Hb_035995_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.00629131 0.0261988 0.0289995 0 0.0034593
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.00270038 0.0146602

CAGE analysis