Hb_002184_080

Information

Type -
Description -
Location Contig2184: 138832-142649
Sequence    

Annotation

kegg
ID rcu:RCOM_1590200
description triacylglycerol lipase, putative
nr
ID XP_002510203.1
description triacylglycerol lipase, putative [Ricinus communis]
swissprot
ID Q9LNC2
description Phospholipase A1-IIalpha OS=Arabidopsis thaliana GN=At1g06250 PE=2 SV=1
trembl
ID B9R7B0
description Triacylglycerol acidic lipase TAL5 OS=Ricinus communis GN=TAL5 PE=2 SV=1
Gene Ontology
ID GO:0016787
description lipase class 3 family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_22514: 141868-142603
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002184_080 0.0 - - triacylglycerol lipase, putative [Ricinus communis]
2 Hb_000679_250 0.1239372214 - - PREDICTED: uncharacterized protein LOC105637632 isoform X1 [Jatropha curcas]
3 Hb_002518_220 0.1371077399 - - PREDICTED: uncharacterized protein LOC105631001 isoform X2 [Jatropha curcas]
4 Hb_169893_010 0.1389247592 - - PREDICTED: uncharacterized protein LOC105644112 [Jatropha curcas]
5 Hb_006816_490 0.1394424194 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 21 [Jatropha curcas]
6 Hb_000453_020 0.1404992902 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
7 Hb_035995_010 0.1444440142 - - -
8 Hb_008686_010 0.1445908664 - - conserved hypothetical protein [Ricinus communis]
9 Hb_006196_030 0.1460642042 - - PREDICTED: uncharacterized protein LOC105650679 [Jatropha curcas]
10 Hb_050898_030 0.1476677656 - - conserved hypothetical protein [Ricinus communis]
11 Hb_143629_120 0.1488648524 - - Rhicadhesin receptor precursor, putative [Ricinus communis]
12 Hb_043630_030 0.1518494559 - - leucine-rich repeat transmembrane protein kinase [Populus trichocarpa]
13 Hb_004881_010 0.1519071176 transcription factor TF Family: MIKC PREDICTED: agamous-like MADS-box protein AGL1 [Jatropha curcas]
14 Hb_001195_550 0.1533334697 - - PREDICTED: deSI-like protein At4g17486 isoform X1 [Jatropha curcas]
15 Hb_007290_050 0.1533584103 - - PREDICTED: uncharacterized protein LOC105629472 isoform X1 [Jatropha curcas]
16 Hb_004450_020 0.1534167942 - - serine-threonine protein kinase, putative [Ricinus communis]
17 Hb_012132_050 0.1549091988 - - PREDICTED: aspartic proteinase PCS1 [Jatropha curcas]
18 Hb_000742_130 0.1551885284 - - PREDICTED: probable receptor-like protein kinase At1g30570 [Jatropha curcas]
19 Hb_001794_040 0.1554169122 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH63 isoform X1 [Jatropha curcas]
20 Hb_000077_280 0.1567582841 - - ankyrin repeat-containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_002184_080 Hb_002184_080 Hb_000679_250 Hb_000679_250 Hb_002184_080--Hb_000679_250 Hb_002518_220 Hb_002518_220 Hb_002184_080--Hb_002518_220 Hb_169893_010 Hb_169893_010 Hb_002184_080--Hb_169893_010 Hb_006816_490 Hb_006816_490 Hb_002184_080--Hb_006816_490 Hb_000453_020 Hb_000453_020 Hb_002184_080--Hb_000453_020 Hb_035995_010 Hb_035995_010 Hb_002184_080--Hb_035995_010 Hb_015934_080 Hb_015934_080 Hb_000679_250--Hb_015934_080 Hb_002171_020 Hb_002171_020 Hb_000679_250--Hb_002171_020 Hb_033312_070 Hb_033312_070 Hb_000679_250--Hb_033312_070 Hb_000645_160 Hb_000645_160 Hb_000679_250--Hb_000645_160 Hb_004558_060 Hb_004558_060 Hb_000679_250--Hb_004558_060 Hb_000742_130 Hb_000742_130 Hb_002518_220--Hb_000742_130 Hb_003266_090 Hb_003266_090 Hb_002518_220--Hb_003266_090 Hb_003581_050 Hb_003581_050 Hb_002518_220--Hb_003581_050 Hb_043630_030 Hb_043630_030 Hb_002518_220--Hb_043630_030 Hb_006120_210 Hb_006120_210 Hb_002518_220--Hb_006120_210 Hb_012539_100 Hb_012539_100 Hb_002518_220--Hb_012539_100 Hb_008686_010 Hb_008686_010 Hb_169893_010--Hb_008686_010 Hb_001195_550 Hb_001195_550 Hb_169893_010--Hb_001195_550 Hb_070498_010 Hb_070498_010 Hb_169893_010--Hb_070498_010 Hb_002301_400 Hb_002301_400 Hb_169893_010--Hb_002301_400 Hb_003750_120 Hb_003750_120 Hb_169893_010--Hb_003750_120 Hb_128196_010 Hb_128196_010 Hb_169893_010--Hb_128196_010 Hb_006816_490--Hb_169893_010 Hb_006816_490--Hb_070498_010 Hb_006816_490--Hb_008686_010 Hb_015048_020 Hb_015048_020 Hb_006816_490--Hb_015048_020 Hb_006196_030 Hb_006196_030 Hb_006816_490--Hb_006196_030 Hb_000482_120 Hb_000482_120 Hb_000453_020--Hb_000482_120 Hb_003029_120 Hb_003029_120 Hb_000453_020--Hb_003029_120 Hb_010337_040 Hb_010337_040 Hb_000453_020--Hb_010337_040 Hb_003488_040 Hb_003488_040 Hb_000453_020--Hb_003488_040 Hb_000453_020--Hb_012539_100 Hb_035995_010--Hb_004558_060 Hb_001663_060 Hb_001663_060 Hb_035995_010--Hb_001663_060 Hb_154038_040 Hb_154038_040 Hb_035995_010--Hb_154038_040 Hb_002518_020 Hb_002518_020 Hb_035995_010--Hb_002518_020 Hb_001369_190 Hb_001369_190 Hb_035995_010--Hb_001369_190 Hb_035995_010--Hb_000645_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.255083 0.630603 1.10866 0 0.055349
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0333811 0 0 0.0944186 0.328812

CAGE analysis