Hb_005799_020

Information

Type -
Description -
Location Contig5799: 20714-22001
Sequence    

Annotation

kegg
ID pop:POPTR_0001s35430g
description POPTRDRAFT_706794; nodulin MtN3 family protein
nr
ID XP_012081801.1
description PREDICTED: bidirectional sugar transporter SWEET6b [Jatropha curcas]
swissprot
ID A2WSD8
description Bidirectional sugar transporter SWEET6a OS=Oryza sativa subsp. indica GN=SWEET6A PE=3 SV=1
trembl
ID A0A067LAE5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09616 PE=4 SV=1
Gene Ontology
ID GO:0005887
description bidirectional sugar transporter sweet4-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005799_020 0.0 - - PREDICTED: bidirectional sugar transporter SWEET6b [Jatropha curcas]
2 Hb_000261_400 0.1526517089 - - hypothetical protein JCGZ_01125 [Jatropha curcas]
3 Hb_003053_050 0.1818214644 - - PREDICTED: putative phospholipid-transporting ATPase 8 [Jatropha curcas]
4 Hb_006629_020 0.1824990944 - - ferric reductase oxidase [Manihot esculenta]
5 Hb_000964_170 0.1951202425 - - Cellulose synthase A catalytic subunit 6 [UDP-forming], putative [Ricinus communis]
6 Hb_000031_230 0.1953072668 - - PREDICTED: probable cyclic nucleotide-gated ion channel 14 isoform X1 [Jatropha curcas]
7 Hb_057796_010 0.2049297594 - - PREDICTED: uncharacterized protein LOC105801076 [Gossypium raimondii]
8 Hb_002559_030 0.2086267684 - - oxidoreductase, putative [Ricinus communis]
9 Hb_001711_080 0.2091852597 transcription factor TF Family: C2C2-LSD PREDICTED: protein LSD1 isoform X1 [Phoenix dactylifera]
10 Hb_001221_190 0.2098151327 - - PREDICTED: F-box protein At5g50450 [Jatropha curcas]
11 Hb_006422_020 0.2132435771 - - PREDICTED: uncharacterized protein LOC105649338 [Jatropha curcas]
12 Hb_000281_070 0.2137779321 - - rubisco subunit binding-protein beta subunit, rubb, putative [Ricinus communis]
13 Hb_167973_010 0.2140516581 - - PREDICTED: pyrophosphate-energized vacuolar membrane proton pump [Jatropha curcas]
14 Hb_000997_100 0.2185429244 - - PREDICTED: uncharacterized protein LOC105632094 isoform X2 [Jatropha curcas]
15 Hb_004899_340 0.2193557094 - - PREDICTED: probable polygalacturonase [Jatropha curcas]
16 Hb_001675_050 0.2243846564 - - PREDICTED: uncharacterized protein LOC105635000 [Jatropha curcas]
17 Hb_001087_010 0.2252606572 - - PREDICTED: uncharacterized protein LOC105630042 [Jatropha curcas]
18 Hb_078106_010 0.2261403931 - - seed maturation protein PM37 [Populus trichocarpa]
19 Hb_002636_040 0.2266510927 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH49 isoform X1 [Jatropha curcas]
20 Hb_010174_100 0.2287454593 - - PREDICTED: photosystem II core complex proteins psbY, chloroplastic-like [Populus euphratica]

Gene co-expression network

sample Hb_005799_020 Hb_005799_020 Hb_000261_400 Hb_000261_400 Hb_005799_020--Hb_000261_400 Hb_003053_050 Hb_003053_050 Hb_005799_020--Hb_003053_050 Hb_006629_020 Hb_006629_020 Hb_005799_020--Hb_006629_020 Hb_000964_170 Hb_000964_170 Hb_005799_020--Hb_000964_170 Hb_000031_230 Hb_000031_230 Hb_005799_020--Hb_000031_230 Hb_057796_010 Hb_057796_010 Hb_005799_020--Hb_057796_010 Hb_000261_400--Hb_003053_050 Hb_000261_400--Hb_000031_230 Hb_001221_200 Hb_001221_200 Hb_000261_400--Hb_001221_200 Hb_008092_060 Hb_008092_060 Hb_000261_400--Hb_008092_060 Hb_001087_010 Hb_001087_010 Hb_000261_400--Hb_001087_010 Hb_003053_050--Hb_000031_230 Hb_010344_030 Hb_010344_030 Hb_003053_050--Hb_010344_030 Hb_000815_230 Hb_000815_230 Hb_003053_050--Hb_000815_230 Hb_000997_100 Hb_000997_100 Hb_003053_050--Hb_000997_100 Hb_002053_050 Hb_002053_050 Hb_003053_050--Hb_002053_050 Hb_000336_200 Hb_000336_200 Hb_003053_050--Hb_000336_200 Hb_078106_010 Hb_078106_010 Hb_006629_020--Hb_078106_010 Hb_167973_010 Hb_167973_010 Hb_006629_020--Hb_167973_010 Hb_006573_010 Hb_006573_010 Hb_006629_020--Hb_006573_010 Hb_000922_220 Hb_000922_220 Hb_006629_020--Hb_000922_220 Hb_004875_010 Hb_004875_010 Hb_006629_020--Hb_004875_010 Hb_002320_090 Hb_002320_090 Hb_000964_170--Hb_002320_090 Hb_006916_030 Hb_006916_030 Hb_000964_170--Hb_006916_030 Hb_000445_370 Hb_000445_370 Hb_000964_170--Hb_000445_370 Hb_001411_050 Hb_001411_050 Hb_000964_170--Hb_001411_050 Hb_001140_180 Hb_001140_180 Hb_000964_170--Hb_001140_180 Hb_000270_710 Hb_000270_710 Hb_000964_170--Hb_000270_710 Hb_000031_230--Hb_000997_100 Hb_007192_090 Hb_007192_090 Hb_000031_230--Hb_007192_090 Hb_000031_230--Hb_008092_060 Hb_001250_020 Hb_001250_020 Hb_000031_230--Hb_001250_020 Hb_001408_030 Hb_001408_030 Hb_000031_230--Hb_001408_030 Hb_000920_290 Hb_000920_290 Hb_057796_010--Hb_000920_290 Hb_057796_010--Hb_003053_050 Hb_001404_080 Hb_001404_080 Hb_057796_010--Hb_001404_080 Hb_011828_010 Hb_011828_010 Hb_057796_010--Hb_011828_010 Hb_000473_120 Hb_000473_120 Hb_057796_010--Hb_000473_120 Hb_000922_060 Hb_000922_060 Hb_057796_010--Hb_000922_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.111847 1.05945 0.848675 1.96218 0.974586 1.23841
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0791734 0 0.111258 0.177156 2.83675

CAGE analysis