Hb_001408_030

Information

Type -
Description -
Location Contig1408: 26655-31012
Sequence    

Annotation

kegg
ID rcu:RCOM_0759010
description heat shock protein, putative (EC:1.3.1.74)
nr
ID XP_012066679.1
description PREDICTED: stromal 70 kDa heat shock-related protein, chloroplastic [Jatropha curcas]
swissprot
ID Q02028
description Stromal 70 kDa heat shock-related protein, chloroplastic OS=Pisum sativum GN=HSP70 PE=2 SV=1
trembl
ID A0A067L5D7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00245 PE=3 SV=1
Gene Ontology
ID GO:0005524
description stromal 70 kda heat shock-related chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_11026: 26735-30890
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001408_030 0.0 - - PREDICTED: stromal 70 kDa heat shock-related protein, chloroplastic [Jatropha curcas]
2 Hb_008092_050 0.0760824788 - - PREDICTED: uncharacterized protein LOC105142434 [Populus euphratica]
3 Hb_008092_060 0.076884269 - - -
4 Hb_001437_120 0.077009911 - - PREDICTED: ruBisCO large subunit-binding protein subunit alpha [Jatropha curcas]
5 Hb_003929_220 0.1085108661 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
6 Hb_004254_100 0.1099959668 - - PREDICTED: synaptotagmin-4 isoform X1 [Jatropha curcas]
7 Hb_001396_240 0.1102552606 transcription factor TF Family: Orphans PREDICTED: histidine kinase 3 isoform X1 [Jatropha curcas]
8 Hb_028707_110 0.1112259496 - - PREDICTED: uncharacterized protein LOC105645798 [Jatropha curcas]
9 Hb_003900_030 0.1129980417 - - PREDICTED: pentatricopeptide repeat-containing protein At2g41720 isoform X1 [Jatropha curcas]
10 Hb_007192_090 0.1149619979 - - PREDICTED: elongation factor Tu, chloroplastic-like [Glycine max]
11 Hb_005618_150 0.1157856425 - - PREDICTED: protein translocase subunit SecA, chloroplastic [Jatropha curcas]
12 Hb_001472_160 0.1197747102 - - PREDICTED: mitogen-activated protein kinase kinase kinase YODA [Jatropha curcas]
13 Hb_000260_710 0.1201937074 - - PREDICTED: uncharacterized protein LOC105649017 isoform X1 [Jatropha curcas]
14 Hb_002740_190 0.1202632201 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Jatropha curcas]
15 Hb_000771_170 0.1205305505 - - PREDICTED: ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial [Jatropha curcas]
16 Hb_002942_130 0.1243403176 - - PREDICTED: chaperone protein ClpC, chloroplastic [Jatropha curcas]
17 Hb_000031_230 0.1254549701 - - PREDICTED: probable cyclic nucleotide-gated ion channel 14 isoform X1 [Jatropha curcas]
18 Hb_006911_070 0.1255782043 - - 50S ribosomal protein L1p, putative [Ricinus communis]
19 Hb_004466_050 0.1264452784 - - PREDICTED: uncharacterized protein LOC105649250, partial [Jatropha curcas]
20 Hb_000363_060 0.1266090484 transcription factor TF Family: mTERF conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_001408_030 Hb_001408_030 Hb_008092_050 Hb_008092_050 Hb_001408_030--Hb_008092_050 Hb_008092_060 Hb_008092_060 Hb_001408_030--Hb_008092_060 Hb_001437_120 Hb_001437_120 Hb_001408_030--Hb_001437_120 Hb_003929_220 Hb_003929_220 Hb_001408_030--Hb_003929_220 Hb_004254_100 Hb_004254_100 Hb_001408_030--Hb_004254_100 Hb_001396_240 Hb_001396_240 Hb_001408_030--Hb_001396_240 Hb_008092_050--Hb_008092_060 Hb_005618_150 Hb_005618_150 Hb_008092_050--Hb_005618_150 Hb_001307_040 Hb_001307_040 Hb_008092_050--Hb_001307_040 Hb_008092_050--Hb_001437_120 Hb_006911_070 Hb_006911_070 Hb_008092_050--Hb_006911_070 Hb_008092_060--Hb_001437_120 Hb_000031_230 Hb_000031_230 Hb_008092_060--Hb_000031_230 Hb_007192_090 Hb_007192_090 Hb_008092_060--Hb_007192_090 Hb_002276_070 Hb_002276_070 Hb_008092_060--Hb_002276_070 Hb_028707_110 Hb_028707_110 Hb_001437_120--Hb_028707_110 Hb_001437_120--Hb_002276_070 Hb_000997_140 Hb_000997_140 Hb_001437_120--Hb_000997_140 Hb_001437_120--Hb_003929_220 Hb_003929_220--Hb_000997_140 Hb_000771_170 Hb_000771_170 Hb_003929_220--Hb_000771_170 Hb_003929_220--Hb_028707_110 Hb_001472_160 Hb_001472_160 Hb_003929_220--Hb_001472_160 Hb_002942_130 Hb_002942_130 Hb_004254_100--Hb_002942_130 Hb_003900_030 Hb_003900_030 Hb_004254_100--Hb_003900_030 Hb_004254_100--Hb_000771_170 Hb_001040_070 Hb_001040_070 Hb_004254_100--Hb_001040_070 Hb_005883_020 Hb_005883_020 Hb_004254_100--Hb_005883_020 Hb_003462_060 Hb_003462_060 Hb_001396_240--Hb_003462_060 Hb_010344_030 Hb_010344_030 Hb_001396_240--Hb_010344_030 Hb_004994_350 Hb_004994_350 Hb_001396_240--Hb_004994_350 Hb_004466_050 Hb_004466_050 Hb_001396_240--Hb_004466_050 Hb_052128_010 Hb_052128_010 Hb_001396_240--Hb_052128_010 Hb_005250_010 Hb_005250_010 Hb_001396_240--Hb_005250_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
45.6551 70.472 123.987 59.3306 72.6876 86.7816
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
16.9838 15.1477 19.5415 46.8214 240.095

CAGE analysis