Hb_005523_050

Information

Type -
Description -
Location Contig5523: 74047-74940
Sequence    

Annotation

kegg
ID pop:POPTR_0011s15780g
description POPTRDRAFT_569299; hypothetical protein
nr
ID KDP34887.1
description hypothetical protein JCGZ_09175 [Jatropha curcas]
swissprot
ID O04893
description Alpha-glucosidase OS=Spinacia oleracea PE=1 SV=1
trembl
ID A0A067KFI3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09175 PE=3 SV=1
Gene Ontology
ID GO:0004553
description glycosyl hydrolases family 31 protein isoform partial

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005523_050 0.0 - - hypothetical protein JCGZ_09175 [Jatropha curcas]
2 Hb_032717_010 0.1020028998 - - unnamed protein product [Vitis vinifera]
3 Hb_003842_010 0.1137767704 - - receptor protein kinase, putative [Ricinus communis]
4 Hb_002811_020 0.1179014651 - - Cysteine synthase [Morus notabilis]
5 Hb_006681_030 0.1264469857 - - PREDICTED: serine/threonine-protein kinase HT1-like isoform X1 [Populus euphratica]
6 Hb_001345_010 0.129834124 - - hypothetical protein MIMGU_mgv1a010889mg [Erythranthe guttata]
7 Hb_003224_010 0.1385754271 - - -
8 Hb_005276_220 0.1427998847 transcription factor TF Family: bHLH PREDICTED: basic helix-loop-helix protein A [Jatropha curcas]
9 Hb_006788_100 0.1428387436 - - PREDICTED: uncharacterized protein LOC105649919 isoform X1 [Jatropha curcas]
10 Hb_003106_110 0.1429300138 - - betaine aldehyde dehydrogenase 1, chloroplastic [Jatropha curcas]
11 Hb_000108_090 0.1461116579 transcription factor TF Family: MYB PREDICTED: transcription repressor MYB5-like [Jatropha curcas]
12 Hb_001634_080 0.1492021077 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
13 Hb_001565_010 0.1520296829 - - hypothetical protein JCGZ_07371 [Jatropha curcas]
14 Hb_007676_040 0.153849369 - - cellulose synthase, putative [Ricinus communis]
15 Hb_000417_280 0.1540718943 - - conserved hypothetical protein [Ricinus communis]
16 Hb_015306_010 0.1544439907 - - PREDICTED: uncharacterized protein LOC105636357 [Jatropha curcas]
17 Hb_000760_080 0.1558610968 - - mutt domain protein, putative [Ricinus communis]
18 Hb_000521_360 0.1568190902 - - PREDICTED: beta-glucosidase 17-like [Jatropha curcas]
19 Hb_009193_060 0.1570395705 - - PREDICTED: ureide permease 1-like [Jatropha curcas]
20 Hb_000574_370 0.1579763058 - - PREDICTED: formamidopyrimidine-DNA glycosylase isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_005523_050 Hb_005523_050 Hb_032717_010 Hb_032717_010 Hb_005523_050--Hb_032717_010 Hb_003842_010 Hb_003842_010 Hb_005523_050--Hb_003842_010 Hb_002811_020 Hb_002811_020 Hb_005523_050--Hb_002811_020 Hb_006681_030 Hb_006681_030 Hb_005523_050--Hb_006681_030 Hb_001345_010 Hb_001345_010 Hb_005523_050--Hb_001345_010 Hb_003224_010 Hb_003224_010 Hb_005523_050--Hb_003224_010 Hb_006788_100 Hb_006788_100 Hb_032717_010--Hb_006788_100 Hb_000417_280 Hb_000417_280 Hb_032717_010--Hb_000417_280 Hb_001008_110 Hb_001008_110 Hb_032717_010--Hb_001008_110 Hb_001268_300 Hb_001268_300 Hb_032717_010--Hb_001268_300 Hb_001819_010 Hb_001819_010 Hb_032717_010--Hb_001819_010 Hb_003842_010--Hb_001345_010 Hb_005276_220 Hb_005276_220 Hb_003842_010--Hb_005276_220 Hb_002475_030 Hb_002475_030 Hb_003842_010--Hb_002475_030 Hb_000203_080 Hb_000203_080 Hb_003842_010--Hb_000203_080 Hb_003085_080 Hb_003085_080 Hb_003842_010--Hb_003085_080 Hb_009150_060 Hb_009150_060 Hb_003842_010--Hb_009150_060 Hb_002811_020--Hb_003842_010 Hb_011537_020 Hb_011537_020 Hb_002811_020--Hb_011537_020 Hb_000215_250 Hb_000215_250 Hb_002811_020--Hb_000215_250 Hb_001018_080 Hb_001018_080 Hb_002811_020--Hb_001018_080 Hb_002811_020--Hb_003085_080 Hb_003881_020 Hb_003881_020 Hb_006681_030--Hb_003881_020 Hb_000760_080 Hb_000760_080 Hb_006681_030--Hb_000760_080 Hb_006681_030--Hb_003224_010 Hb_134174_010 Hb_134174_010 Hb_006681_030--Hb_134174_010 Hb_007676_040 Hb_007676_040 Hb_006681_030--Hb_007676_040 Hb_001345_010--Hb_007676_040 Hb_000521_360 Hb_000521_360 Hb_001345_010--Hb_000521_360 Hb_005542_040 Hb_005542_040 Hb_001345_010--Hb_005542_040 Hb_001565_010 Hb_001565_010 Hb_001345_010--Hb_001565_010 Hb_001345_010--Hb_005276_220 Hb_000189_160 Hb_000189_160 Hb_003224_010--Hb_000189_160 Hb_005496_170 Hb_005496_170 Hb_003224_010--Hb_005496_170 Hb_000046_430 Hb_000046_430 Hb_003224_010--Hb_000046_430 Hb_094148_010 Hb_094148_010 Hb_003224_010--Hb_094148_010 Hb_009554_030 Hb_009554_030 Hb_003224_010--Hb_009554_030 Hb_002503_050 Hb_002503_050 Hb_003224_010--Hb_002503_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.458531 6.64368 8.61081 4.20901 0.311744 0.65886
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0838352 13.852 8.10067

CAGE analysis