Hb_004696_070

Information

Type -
Description -
Location Contig4696: 54632-57956
Sequence    

Annotation

kegg
ID tcc:TCM_006896
description BTB/POZ domain-containing protein isoform 1
nr
ID XP_012069947.1
description PREDICTED: BTB/POZ domain-containing protein At3g05675-like [Jatropha curcas]
swissprot
ID Q8RX01
description BTB/POZ domain-containing protein At3g05675 OS=Arabidopsis thaliana GN=At3g05675 PE=2 SV=1
trembl
ID A0A067LP54
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10089 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_44192: 54590-57956
cDNA
(Sanger)
(ID:Location)		 006_D17.ab1: 54590-55318 , 008_E17.ab1: 54590-55244 , 042_N22.ab1: 54590-55295 , 043_H04.ab1: 54590-55376 , 050_L17.ab1: 54590-55267

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004696_070 0.0 - - PREDICTED: BTB/POZ domain-containing protein At3g05675-like [Jatropha curcas]
2 Hb_012490_010 0.0456711278 - - PREDICTED: uncharacterized protein LOC105637916 isoform X2 [Jatropha curcas]
3 Hb_008686_020 0.0759051134 - - PREDICTED: uncharacterized protein LOC105632277 isoform X1 [Jatropha curcas]
4 Hb_002686_140 0.078336006 - - PREDICTED: general negative regulator of transcription subunit 3 isoform X1 [Jatropha curcas]
5 Hb_020805_150 0.0791313934 - - ubiquitin-protein ligase, putative [Ricinus communis]
6 Hb_001951_100 0.0793402352 - - Calcium-activated outward-rectifying potassium channel, putative [Ricinus communis]
7 Hb_000331_100 0.0800203164 - - PREDICTED: uncharacterized protein LOC105640211 isoform X1 [Jatropha curcas]
8 Hb_004551_020 0.0806316984 - - PREDICTED: polyadenylation and cleavage factor homolog 4 [Jatropha curcas]
9 Hb_002918_320 0.0842637781 transcription factor TF Family: HB PREDICTED: uncharacterized protein LOC105649589 isoform X1 [Jatropha curcas]
10 Hb_002928_190 0.0843638754 transcription factor TF Family: RWP-RK PREDICTED: protein NLP4 [Jatropha curcas]
11 Hb_000413_250 0.0856285418 - - Cysteine-rich RLK 29 [Theobroma cacao]
12 Hb_021596_010 0.087087151 - - PREDICTED: uncharacterized protein LOC105647118 [Jatropha curcas]
13 Hb_002248_120 0.0879540294 - - PREDICTED: probable serine/threonine-protein kinase At1g54610 [Jatropha curcas]
14 Hb_003605_220 0.0880819533 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Jatropha curcas]
15 Hb_000367_020 0.0898855438 - - PREDICTED: uncharacterized protein LOC105640608 [Jatropha curcas]
16 Hb_007012_040 0.0918442098 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 44 [Jatropha curcas]
17 Hb_005649_080 0.0921895852 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase RPK2 [Jatropha curcas]
18 Hb_003124_270 0.0934291022 transcription factor TF Family: LUG hypothetical protein JCGZ_13223 [Jatropha curcas]
19 Hb_001911_010 0.0935334162 - - PREDICTED: ALA-interacting subunit 3-like [Jatropha curcas]
20 Hb_008165_020 0.0940655368 - - PREDICTED: CCR4-NOT transcription complex subunit 10 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_004696_070 Hb_004696_070 Hb_012490_010 Hb_012490_010 Hb_004696_070--Hb_012490_010 Hb_008686_020 Hb_008686_020 Hb_004696_070--Hb_008686_020 Hb_002686_140 Hb_002686_140 Hb_004696_070--Hb_002686_140 Hb_020805_150 Hb_020805_150 Hb_004696_070--Hb_020805_150 Hb_001951_100 Hb_001951_100 Hb_004696_070--Hb_001951_100 Hb_000331_100 Hb_000331_100 Hb_004696_070--Hb_000331_100 Hb_012490_010--Hb_008686_020 Hb_002928_190 Hb_002928_190 Hb_012490_010--Hb_002928_190 Hb_004551_020 Hb_004551_020 Hb_012490_010--Hb_004551_020 Hb_012490_010--Hb_020805_150 Hb_000170_100 Hb_000170_100 Hb_012490_010--Hb_000170_100 Hb_002918_320 Hb_002918_320 Hb_008686_020--Hb_002918_320 Hb_008686_020--Hb_001951_100 Hb_008686_020--Hb_002928_190 Hb_008686_020--Hb_004551_020 Hb_000367_020 Hb_000367_020 Hb_008686_020--Hb_000367_020 Hb_002631_210 Hb_002631_210 Hb_002686_140--Hb_002631_210 Hb_002276_040 Hb_002276_040 Hb_002686_140--Hb_002276_040 Hb_000080_110 Hb_000080_110 Hb_002686_140--Hb_000080_110 Hb_000347_300 Hb_000347_300 Hb_002686_140--Hb_000347_300 Hb_009615_160 Hb_009615_160 Hb_002686_140--Hb_009615_160 Hb_022425_060 Hb_022425_060 Hb_002686_140--Hb_022425_060 Hb_020805_150--Hb_022425_060 Hb_020805_150--Hb_002928_190 Hb_170077_010 Hb_170077_010 Hb_020805_150--Hb_170077_010 Hb_003918_030 Hb_003918_030 Hb_020805_150--Hb_003918_030 Hb_005649_080 Hb_005649_080 Hb_020805_150--Hb_005649_080 Hb_001951_100--Hb_000367_020 Hb_001951_100--Hb_012490_010 Hb_000445_130 Hb_000445_130 Hb_001951_100--Hb_000445_130 Hb_000340_360 Hb_000340_360 Hb_001951_100--Hb_000340_360 Hb_008165_020 Hb_008165_020 Hb_000331_100--Hb_008165_020 Hb_000428_030 Hb_000428_030 Hb_000331_100--Hb_000428_030 Hb_013358_060 Hb_013358_060 Hb_000331_100--Hb_013358_060 Hb_000035_100 Hb_000035_100 Hb_000331_100--Hb_000035_100 Hb_003964_110 Hb_003964_110 Hb_000331_100--Hb_003964_110 Hb_009476_120 Hb_009476_120 Hb_000331_100--Hb_009476_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.73872 47.839 19.826 24.2511 11.8353 8.8968
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.17708 7.02372 13.2959 22.0125 27.5028

CAGE analysis