Hb_002979_030

Information

Type -
Description -
Location Contig2979: 74288-78074
Sequence    

Annotation

kegg
ID rcu:RCOM_0799040
description Serine/threonine-protein kinase, putative (EC:2.7.11.1)
nr
ID XP_012077351.1
description PREDICTED: serine/threonine-protein kinase Aurora-1 isoform X2 [Jatropha curcas]
swissprot
ID Q9M077
description Serine/threonine-protein kinase Aurora-1 OS=Arabidopsis thaliana GN=AUR1 PE=1 SV=1
trembl
ID A0A067KQQ5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07715 PE=4 SV=1
Gene Ontology
ID GO:0004674
description serine threonine-protein kinase aurora-1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_31159: 74153-76169
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002979_030 0.0 - - PREDICTED: serine/threonine-protein kinase Aurora-1 isoform X2 [Jatropha curcas]
2 Hb_000028_240 0.1075797958 - - conserved hypothetical protein [Ricinus communis]
3 Hb_002007_040 0.1636568355 - - unnamed protein product [Coffea canephora]
4 Hb_000155_150 0.1727345826 - - hypothetical protein CARUB_v10021660mg, partial [Capsella rubella]
5 Hb_003401_010 0.1778948484 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Jatropha curcas]
6 Hb_006570_040 0.1881434033 - - hypothetical protein CICLE_v10002683mg [Citrus clementina]
7 Hb_000663_070 0.1911640994 - - cyclin A, putative [Ricinus communis]
8 Hb_002307_020 0.1959149632 - - PREDICTED: histone H1-like [Jatropha curcas]
9 Hb_000051_080 0.2085420443 - - PREDICTED: DNA (cytosine-5)-methyltransferase CMT3 [Jatropha curcas]
10 Hb_001780_080 0.2145932664 - - PREDICTED: tubulin beta-2 chain [Jatropha curcas]
11 Hb_000139_280 0.2149941276 - - PREDICTED: mitogen-activated protein kinase kinase kinase NPK1 isoform X1 [Jatropha curcas]
12 Hb_006275_060 0.2158809201 - - hypothetical protein CARUB_v10021660mg, partial [Capsella rubella]
13 Hb_005946_020 0.2182628995 - - Pleiotropic drug resistance protein 4 [Triticum urartu]
14 Hb_000172_090 0.2274583888 - - PREDICTED: uncharacterized protein LOC105650755 [Jatropha curcas]
15 Hb_003784_040 0.228497869 - - Afadin- and alpha-actinin-binding protein, putative [Ricinus communis]
16 Hb_001277_120 0.2285396298 - - PREDICTED: calmodulin-like protein 11 [Jatropha curcas]
17 Hb_005162_120 0.2303049838 - - ferric reductase oxidase [Manihot esculenta]
18 Hb_004116_120 0.2309536454 - - PREDICTED: protein EARLY FLOWERING 4 [Jatropha curcas]
19 Hb_000111_430 0.2345427951 - - PREDICTED: cytosolic sulfotransferase 15-like [Jatropha curcas]
20 Hb_005504_040 0.2359866259 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_002979_030 Hb_002979_030 Hb_000028_240 Hb_000028_240 Hb_002979_030--Hb_000028_240 Hb_002007_040 Hb_002007_040 Hb_002979_030--Hb_002007_040 Hb_000155_150 Hb_000155_150 Hb_002979_030--Hb_000155_150 Hb_003401_010 Hb_003401_010 Hb_002979_030--Hb_003401_010 Hb_006570_040 Hb_006570_040 Hb_002979_030--Hb_006570_040 Hb_000663_070 Hb_000663_070 Hb_002979_030--Hb_000663_070 Hb_000028_250 Hb_000028_250 Hb_000028_240--Hb_000028_250 Hb_000028_240--Hb_006570_040 Hb_005162_120 Hb_005162_120 Hb_000028_240--Hb_005162_120 Hb_000441_210 Hb_000441_210 Hb_000028_240--Hb_000441_210 Hb_002205_180 Hb_002205_180 Hb_000028_240--Hb_002205_180 Hb_002307_020 Hb_002307_020 Hb_002007_040--Hb_002307_020 Hb_000051_080 Hb_000051_080 Hb_002007_040--Hb_000051_080 Hb_001478_020 Hb_001478_020 Hb_002007_040--Hb_001478_020 Hb_005725_150 Hb_005725_150 Hb_002007_040--Hb_005725_150 Hb_001501_070 Hb_001501_070 Hb_002007_040--Hb_001501_070 Hb_003784_040 Hb_003784_040 Hb_002007_040--Hb_003784_040 Hb_006275_060 Hb_006275_060 Hb_000155_150--Hb_006275_060 Hb_000155_150--Hb_002307_020 Hb_005504_040 Hb_005504_040 Hb_000155_150--Hb_005504_040 Hb_000155_150--Hb_003784_040 Hb_000172_090 Hb_000172_090 Hb_000155_150--Hb_000172_090 Hb_001780_080 Hb_001780_080 Hb_000155_150--Hb_001780_080 Hb_003401_010--Hb_006570_040 Hb_003401_010--Hb_000028_240 Hb_027472_110 Hb_027472_110 Hb_003401_010--Hb_027472_110 Hb_002639_170 Hb_002639_170 Hb_003401_010--Hb_002639_170 Hb_003401_010--Hb_005162_120 Hb_005946_020 Hb_005946_020 Hb_006570_040--Hb_005946_020 Hb_000139_280 Hb_000139_280 Hb_006570_040--Hb_000139_280 Hb_000190_220 Hb_000190_220 Hb_006570_040--Hb_000190_220 Hb_000260_040 Hb_000260_040 Hb_006570_040--Hb_000260_040 Hb_000956_050 Hb_000956_050 Hb_006570_040--Hb_000956_050 Hb_000034_150 Hb_000034_150 Hb_000663_070--Hb_000034_150 Hb_000663_070--Hb_000172_090 Hb_000663_070--Hb_006570_040 Hb_000663_070--Hb_000028_240 Hb_000556_130 Hb_000556_130 Hb_000663_070--Hb_000556_130 Hb_000663_070--Hb_001780_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.118578 0.64446 53.2301 14.4598 0.0889197 0.0368839
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.16025 6.34699 0.0632912 2.66843 1.47825

CAGE analysis