Hb_001814_080

Information

Type -
Description -
Location Contig1814: 63249-63731
Sequence    

Annotation

kegg
ID fve:101294366
description oleosin 16 kDa-like
nr
ID XP_012092953.1
description PREDICTED: oleosin 1-like [Jatropha curcas]
swissprot
ID Q96543
description Oleosin 16 kDa OS=Bromus secalinus GN=OLE16 PE=2 SV=1
trembl
ID A0A067JBH4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05847 PE=4 SV=1
Gene Ontology
ID GO:0012511
description oleosin 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_17648: 63358-63583
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001814_080 0.0 - - PREDICTED: oleosin 1-like [Jatropha curcas]
2 Hb_000025_400 0.1621384953 - - PREDICTED: uncharacterized protein LOC105110770 [Populus euphratica]
3 Hb_001259_100 0.1671261565 - - chloride channel-like family protein [Populus trichocarpa]
4 Hb_002461_070 0.1680685653 - - gibberellin 2-oxidase, putative [Ricinus communis]
5 Hb_002928_120 0.1707729566 - - 1,4-alpha-glucan branching enzyme [Manihot esculenta]
6 Hb_010381_110 0.1739329327 - - PRA1 family protein [Theobroma cacao]
7 Hb_000429_110 0.1765609272 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein WIP2-like [Populus euphratica]
8 Hb_000540_040 0.1843739917 - - PREDICTED: chitinase 2 [Amborella trichopoda]
9 Hb_001976_120 0.1844974567 - - PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Jatropha curcas]
10 Hb_005695_020 0.1853839791 - - PREDICTED: low affinity sulfate transporter 3 [Jatropha curcas]
11 Hb_048643_010 0.1868068806 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
12 Hb_002053_090 0.1900355756 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000152_460 0.1921376848 - - PREDICTED: protein EXORDIUM-like 3 [Jatropha curcas]
14 Hb_004531_110 0.194057198 - - PREDICTED: aquaporin TIP2-1 [Jatropha curcas]
15 Hb_140848_010 0.1959885638 - - hypothetical protein POPTR_0014s17480g [Populus trichocarpa]
16 Hb_012727_010 0.19797952 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]
17 Hb_001357_030 0.2030009127 - - hypothetical protein F383_04880 [Gossypium arboreum]
18 Hb_001148_040 0.2049553516 - - hypothetical protein JCGZ_07831 [Jatropha curcas]
19 Hb_001277_420 0.2064857239 - - PREDICTED: protein lin-12-like isoform X2 [Populus euphratica]
20 Hb_002119_070 0.2072621905 transcription factor TF Family: C2H2 zinc finger protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_001814_080 Hb_001814_080 Hb_000025_400 Hb_000025_400 Hb_001814_080--Hb_000025_400 Hb_001259_100 Hb_001259_100 Hb_001814_080--Hb_001259_100 Hb_002461_070 Hb_002461_070 Hb_001814_080--Hb_002461_070 Hb_002928_120 Hb_002928_120 Hb_001814_080--Hb_002928_120 Hb_010381_110 Hb_010381_110 Hb_001814_080--Hb_010381_110 Hb_000429_110 Hb_000429_110 Hb_001814_080--Hb_000429_110 Hb_000465_260 Hb_000465_260 Hb_000025_400--Hb_000465_260 Hb_008468_030 Hb_008468_030 Hb_000025_400--Hb_008468_030 Hb_000056_280 Hb_000056_280 Hb_000025_400--Hb_000056_280 Hb_000025_400--Hb_002928_120 Hb_005016_020 Hb_005016_020 Hb_000025_400--Hb_005016_020 Hb_004631_110 Hb_004631_110 Hb_000025_400--Hb_004631_110 Hb_073171_010 Hb_073171_010 Hb_001259_100--Hb_073171_010 Hb_052764_080 Hb_052764_080 Hb_001259_100--Hb_052764_080 Hb_005183_200 Hb_005183_200 Hb_001259_100--Hb_005183_200 Hb_001259_100--Hb_000429_110 Hb_004044_030 Hb_004044_030 Hb_001259_100--Hb_004044_030 Hb_001259_100--Hb_010381_110 Hb_010162_010 Hb_010162_010 Hb_002461_070--Hb_010162_010 Hb_156696_010 Hb_156696_010 Hb_002461_070--Hb_156696_010 Hb_001006_030 Hb_001006_030 Hb_002461_070--Hb_001006_030 Hb_008001_020 Hb_008001_020 Hb_002461_070--Hb_008001_020 Hb_001821_030 Hb_001821_030 Hb_002461_070--Hb_001821_030 Hb_002374_060 Hb_002374_060 Hb_002461_070--Hb_002374_060 Hb_000793_040 Hb_000793_040 Hb_002928_120--Hb_000793_040 Hb_002928_180 Hb_002928_180 Hb_002928_120--Hb_002928_180 Hb_001021_030 Hb_001021_030 Hb_002928_120--Hb_001021_030 Hb_025432_010 Hb_025432_010 Hb_002928_120--Hb_025432_010 Hb_002928_120--Hb_000429_110 Hb_000236_110 Hb_000236_110 Hb_002928_120--Hb_000236_110 Hb_064047_010 Hb_064047_010 Hb_010381_110--Hb_064047_010 Hb_001148_040 Hb_001148_040 Hb_010381_110--Hb_001148_040 Hb_005695_020 Hb_005695_020 Hb_010381_110--Hb_005695_020 Hb_004032_250 Hb_004032_250 Hb_010381_110--Hb_004032_250 Hb_003371_260 Hb_003371_260 Hb_010381_110--Hb_003371_260 Hb_000429_110--Hb_002928_180 Hb_000429_110--Hb_052764_080 Hb_010174_190 Hb_010174_190 Hb_000429_110--Hb_010174_190 Hb_001355_070 Hb_001355_070 Hb_000429_110--Hb_001355_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0606052 1.81228 0.143499 2.33696 0.114058 0.173699
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.142145 0 0.187787 1.53709 0.207097

CAGE analysis