Hb_001675_190

Information

Type -
Description -
Location Contig1675: 132997-140731
Sequence    

Annotation

kegg
ID pop:POPTR_0001s18590g
description POPTRDRAFT_705740; hexose transporter family protein
nr
ID XP_012073379.1
description PREDICTED: probable plastidic glucose transporter 3 [Jatropha curcas]
swissprot
ID Q2V4B9
description Probable plastidic glucose transporter 3 OS=Arabidopsis thaliana GN=At1g79820 PE=2 SV=2
trembl
ID A0A067KZK9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06310 PE=3 SV=1
Gene Ontology
ID GO:0005768
description probable plastidic glucose transporter 3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_15525: 133059-140778 , PASA_asmbl_15528: 139563-139768
cDNA
(Sanger)
(ID:Location)		 036_H08.ab1: 133059-135772 , 050_L09.ab1: 133059-135066

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001675_190 0.0 - - PREDICTED: probable plastidic glucose transporter 3 [Jatropha curcas]
2 Hb_001491_030 0.1010812063 - - PREDICTED: uncharacterized protein LOC105649804 isoform X1 [Jatropha curcas]
3 Hb_011926_040 0.1275551027 - - PREDICTED: uncharacterized protein At1g04910 isoform X1 [Jatropha curcas]
4 Hb_000058_110 0.1288667712 - - PREDICTED: putative BPI/LBP family protein At1g04970 isoform X1 [Jatropha curcas]
5 Hb_000056_130 0.1304933582 - - Sucrose Transporter 2C [Hevea brasiliensis subsp. brasiliensis]
6 Hb_000200_350 0.13249692 - - PREDICTED: uncharacterized protein LOC105636929 [Jatropha curcas]
7 Hb_006810_030 0.1353577935 - - Uncharacterized protein isoform 1 [Theobroma cacao]
8 Hb_000172_350 0.1356293259 - - PREDICTED: uncharacterized protein LOC105650963 [Jatropha curcas]
9 Hb_006006_060 0.1364183253 - - PREDICTED: triacylglycerol lipase 1 isoform X2 [Jatropha curcas]
10 Hb_000613_010 0.1390770551 - - PREDICTED: uncharacterized protein LOC105647991 [Jatropha curcas]
11 Hb_000836_290 0.1447396143 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
12 Hb_000071_150 0.1451463655 - - Stearoy-ACP desaturase [Ricinus communis]
13 Hb_000399_060 0.1455875321 - - PREDICTED: uncharacterized protein LOC105649658 [Jatropha curcas]
14 Hb_002226_080 0.1467217785 - - PREDICTED: uncharacterized protein LOC105641402 isoform X1 [Jatropha curcas]
15 Hb_000922_300 0.1467351575 - - PREDICTED: GDSL esterase/lipase At5g62930 isoform X1 [Cucumis melo]
16 Hb_027445_030 0.1471679006 - - F-box/LRR-repeat protein, putative [Ricinus communis]
17 Hb_021495_020 0.147304332 - - chitinase, putative [Ricinus communis]
18 Hb_000347_040 0.1481754611 - - hypothetical protein JCGZ_24660 [Jatropha curcas]
19 Hb_000934_110 0.1494943973 - - PREDICTED: protein trichome berefringence-like 7 [Jatropha curcas]
20 Hb_000014_040 0.1501503173 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_001675_190 Hb_001675_190 Hb_001491_030 Hb_001491_030 Hb_001675_190--Hb_001491_030 Hb_011926_040 Hb_011926_040 Hb_001675_190--Hb_011926_040 Hb_000058_110 Hb_000058_110 Hb_001675_190--Hb_000058_110 Hb_000056_130 Hb_000056_130 Hb_001675_190--Hb_000056_130 Hb_000200_350 Hb_000200_350 Hb_001675_190--Hb_000200_350 Hb_006810_030 Hb_006810_030 Hb_001675_190--Hb_006810_030 Hb_007765_040 Hb_007765_040 Hb_001491_030--Hb_007765_040 Hb_001491_030--Hb_000056_130 Hb_002226_080 Hb_002226_080 Hb_001491_030--Hb_002226_080 Hb_001491_030--Hb_000058_110 Hb_000359_310 Hb_000359_310 Hb_001491_030--Hb_000359_310 Hb_009913_040 Hb_009913_040 Hb_011926_040--Hb_009913_040 Hb_000399_060 Hb_000399_060 Hb_011926_040--Hb_000399_060 Hb_006006_060 Hb_006006_060 Hb_011926_040--Hb_006006_060 Hb_000173_060 Hb_000173_060 Hb_011926_040--Hb_000173_060 Hb_174865_040 Hb_174865_040 Hb_011926_040--Hb_174865_040 Hb_000638_070 Hb_000638_070 Hb_011926_040--Hb_000638_070 Hb_000058_110--Hb_002226_080 Hb_001440_020 Hb_001440_020 Hb_000058_110--Hb_001440_020 Hb_009252_030 Hb_009252_030 Hb_000058_110--Hb_009252_030 Hb_005977_100 Hb_005977_100 Hb_000058_110--Hb_005977_100 Hb_000359_190 Hb_000359_190 Hb_000058_110--Hb_000359_190 Hb_000056_130--Hb_002226_080 Hb_008511_020 Hb_008511_020 Hb_000056_130--Hb_008511_020 Hb_009569_040 Hb_009569_040 Hb_000056_130--Hb_009569_040 Hb_002928_090 Hb_002928_090 Hb_000056_130--Hb_002928_090 Hb_001157_230 Hb_001157_230 Hb_000056_130--Hb_001157_230 Hb_000056_130--Hb_006810_030 Hb_000200_350--Hb_006006_060 Hb_000934_110 Hb_000934_110 Hb_000200_350--Hb_000934_110 Hb_010344_030 Hb_010344_030 Hb_000200_350--Hb_010344_030 Hb_009020_040 Hb_009020_040 Hb_000200_350--Hb_009020_040 Hb_000200_350--Hb_001157_230 Hb_024184_010 Hb_024184_010 Hb_000200_350--Hb_024184_010 Hb_001191_110 Hb_001191_110 Hb_006810_030--Hb_001191_110 Hb_006810_030--Hb_001491_030 Hb_000136_140 Hb_000136_140 Hb_006810_030--Hb_000136_140 Hb_000184_070 Hb_000184_070 Hb_006810_030--Hb_000184_070 Hb_000071_150 Hb_000071_150 Hb_006810_030--Hb_000071_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.91572 3.59131 11.3909 25.9464 15.6384 14.3381
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.97358 3.27873 5.55444 5.23831 23.3845

CAGE analysis