Hb_001454_030

Information

Type -
Description -
Location Contig1454: 26248-26685
Sequence    

Annotation

kegg
ID tcc:TCM_021194
description Flowering promoting factor 1
nr
ID XP_012083921.1
description PREDICTED: flowering-promoting factor 1-like protein 3 [Jatropha curcas]
swissprot
ID Q0E1D7
description Flowering-promoting factor 1-like protein 3 OS=Oryza sativa subsp. japonica GN=Os02g0460200 PE=2 SV=1
trembl
ID A0A067K6A6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18865 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001454_030 0.0 - - PREDICTED: flowering-promoting factor 1-like protein 3 [Jatropha curcas]
2 Hb_103942_020 0.0348629573 - - unknown [Zea mays]
3 Hb_007441_320 0.0544971446 - - PREDICTED: putative invertase inhibitor [Jatropha curcas]
4 Hb_000628_080 0.066901067 - - hypothetical protein JCGZ_04283 [Jatropha curcas]
5 Hb_001634_070 0.0763399051 - - conserved hypothetical protein [Ricinus communis]
6 Hb_002186_190 0.0780239018 - - -
7 Hb_003607_040 0.0838488537 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
8 Hb_000012_340 0.0843832017 - - PREDICTED: inorganic pyrophosphatase 3-like [Jatropha curcas]
9 Hb_009896_010 0.0941980467 - - ABC transporter G family member 15 [Morus notabilis]
10 Hb_118941_010 0.096398593 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
11 Hb_001597_040 0.0966111332 - - -
12 Hb_001277_390 0.0968247738 - - PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 5 [Jatropha curcas]
13 Hb_002215_020 0.0976531644 - - hypothetical protein JCGZ_13728 [Jatropha curcas]
14 Hb_005539_330 0.0982052779 - - PREDICTED: WAT1-related protein At2g39510-like [Jatropha curcas]
15 Hb_017524_020 0.0989599595 - - Rho GDP-dissociation inhibitor, putative [Ricinus communis]
16 Hb_120496_010 0.0993312412 - - PREDICTED: CSC1-like protein At1g32090 [Cicer arietinum]
17 Hb_006846_050 0.1002091432 - - Rhicadhesin receptor precursor, putative [Ricinus communis]
18 Hb_000331_660 0.1055760094 - - PREDICTED: vignain [Jatropha curcas]
19 Hb_001123_080 0.1056542456 - - conserved hypothetical protein [Ricinus communis]
20 Hb_085158_010 0.1059849077 transcription factor TF Family: C2H2 TRANSPARENT TESTA 1 protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_001454_030 Hb_001454_030 Hb_103942_020 Hb_103942_020 Hb_001454_030--Hb_103942_020 Hb_007441_320 Hb_007441_320 Hb_001454_030--Hb_007441_320 Hb_000628_080 Hb_000628_080 Hb_001454_030--Hb_000628_080 Hb_001634_070 Hb_001634_070 Hb_001454_030--Hb_001634_070 Hb_002186_190 Hb_002186_190 Hb_001454_030--Hb_002186_190 Hb_003607_040 Hb_003607_040 Hb_001454_030--Hb_003607_040 Hb_103942_020--Hb_007441_320 Hb_103942_020--Hb_000628_080 Hb_103942_020--Hb_003607_040 Hb_000012_340 Hb_000012_340 Hb_103942_020--Hb_000012_340 Hb_103942_020--Hb_002186_190 Hb_007441_320--Hb_003607_040 Hb_000527_090 Hb_000527_090 Hb_007441_320--Hb_000527_090 Hb_120496_010 Hb_120496_010 Hb_007441_320--Hb_120496_010 Hb_006452_080 Hb_006452_080 Hb_007441_320--Hb_006452_080 Hb_017524_020 Hb_017524_020 Hb_000628_080--Hb_017524_020 Hb_001277_390 Hb_001277_390 Hb_000628_080--Hb_001277_390 Hb_000905_130 Hb_000905_130 Hb_000628_080--Hb_000905_130 Hb_006618_060 Hb_006618_060 Hb_000628_080--Hb_006618_060 Hb_008493_020 Hb_008493_020 Hb_001634_070--Hb_008493_020 Hb_060416_010 Hb_060416_010 Hb_001634_070--Hb_060416_010 Hb_009896_010 Hb_009896_010 Hb_001634_070--Hb_009896_010 Hb_053058_010 Hb_053058_010 Hb_001634_070--Hb_053058_010 Hb_001597_040 Hb_001597_040 Hb_001634_070--Hb_001597_040 Hb_000027_020 Hb_000027_020 Hb_001634_070--Hb_000027_020 Hb_000429_070 Hb_000429_070 Hb_002186_190--Hb_000429_070 Hb_001401_130 Hb_001401_130 Hb_002186_190--Hb_001401_130 Hb_000637_090 Hb_000637_090 Hb_002186_190--Hb_000637_090 Hb_002186_190--Hb_000012_340 Hb_007677_010 Hb_007677_010 Hb_002186_190--Hb_007677_010 Hb_009470_010 Hb_009470_010 Hb_002186_190--Hb_009470_010 Hb_002215_020 Hb_002215_020 Hb_003607_040--Hb_002215_020 Hb_116679_010 Hb_116679_010 Hb_003607_040--Hb_116679_010 Hb_003607_040--Hb_000012_340 Hb_000358_070 Hb_000358_070 Hb_003607_040--Hb_000358_070 Hb_000816_170 Hb_000816_170 Hb_003607_040--Hb_000816_170 Hb_029508_050 Hb_029508_050 Hb_003607_040--Hb_029508_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.247939 0.222264 14.2505 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.239151

CAGE analysis