Hb_000628_080

Information

Type -
Description -
Location Contig628: 137170-137442
Sequence    

Annotation

kegg
ID pop:POPTR_0008s07850g
description hypothetical protein
nr
ID KDP38358.1
description hypothetical protein JCGZ_04283 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KTR3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04283 PE=4 SV=1
Gene Ontology
ID GO:0005622
description calcium-binding ef-hand family

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000628_080 0.0 - - hypothetical protein JCGZ_04283 [Jatropha curcas]
2 Hb_103942_020 0.0661330708 - - unknown [Zea mays]
3 Hb_001454_030 0.066901067 - - PREDICTED: flowering-promoting factor 1-like protein 3 [Jatropha curcas]
4 Hb_017524_020 0.0740628552 - - Rho GDP-dissociation inhibitor, putative [Ricinus communis]
5 Hb_001277_390 0.0813481866 - - PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 5 [Jatropha curcas]
6 Hb_000905_130 0.0822794946 - - PREDICTED: DNA-damage-repair/toleration protein DRT100 [Jatropha curcas]
7 Hb_006618_060 0.0857887036 - - PREDICTED: 21 kDa protein [Jatropha curcas]
8 Hb_007441_320 0.0859006509 - - PREDICTED: putative invertase inhibitor [Jatropha curcas]
9 Hb_006846_050 0.086125003 - - Rhicadhesin receptor precursor, putative [Ricinus communis]
10 Hb_120496_010 0.0878123305 - - PREDICTED: CSC1-like protein At1g32090 [Cicer arietinum]
11 Hb_002701_200 0.0880950644 - - PREDICTED: COBRA-like protein 4 [Jatropha curcas]
12 Hb_118941_010 0.0882470201 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
13 Hb_000224_070 0.0909090922 - - -
14 Hb_001634_070 0.1003310036 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000431_040 0.1006845056 - - PREDICTED: uncharacterized protein LOC105635551 [Jatropha curcas]
16 Hb_085158_010 0.1020068743 transcription factor TF Family: C2H2 TRANSPARENT TESTA 1 protein, putative [Ricinus communis]
17 Hb_000296_030 0.1043325725 - - PREDICTED: uncharacterized protein LOC105636578 [Jatropha curcas]
18 Hb_001597_040 0.1067714905 - - -
19 Hb_001247_050 0.106838355 - - PREDICTED: WAT1-related protein At1g09380 [Jatropha curcas]
20 Hb_002232_340 0.107289214 - - Sodium transporter hkt1-like protein, putative [Theobroma cacao]

Gene co-expression network

sample Hb_000628_080 Hb_000628_080 Hb_103942_020 Hb_103942_020 Hb_000628_080--Hb_103942_020 Hb_001454_030 Hb_001454_030 Hb_000628_080--Hb_001454_030 Hb_017524_020 Hb_017524_020 Hb_000628_080--Hb_017524_020 Hb_001277_390 Hb_001277_390 Hb_000628_080--Hb_001277_390 Hb_000905_130 Hb_000905_130 Hb_000628_080--Hb_000905_130 Hb_006618_060 Hb_006618_060 Hb_000628_080--Hb_006618_060 Hb_103942_020--Hb_001454_030 Hb_007441_320 Hb_007441_320 Hb_103942_020--Hb_007441_320 Hb_003607_040 Hb_003607_040 Hb_103942_020--Hb_003607_040 Hb_000012_340 Hb_000012_340 Hb_103942_020--Hb_000012_340 Hb_002186_190 Hb_002186_190 Hb_103942_020--Hb_002186_190 Hb_001454_030--Hb_007441_320 Hb_001634_070 Hb_001634_070 Hb_001454_030--Hb_001634_070 Hb_001454_030--Hb_002186_190 Hb_001454_030--Hb_003607_040 Hb_017524_020--Hb_001277_390 Hb_017524_020--Hb_000905_130 Hb_017524_020--Hb_103942_020 Hb_017524_020--Hb_001454_030 Hb_000224_070 Hb_000224_070 Hb_017524_020--Hb_000224_070 Hb_118941_010 Hb_118941_010 Hb_001277_390--Hb_118941_010 Hb_001277_390--Hb_000224_070 Hb_120496_010 Hb_120496_010 Hb_001277_390--Hb_120496_010 Hb_001591_020 Hb_001591_020 Hb_001277_390--Hb_001591_020 Hb_000733_170 Hb_000733_170 Hb_001277_390--Hb_000733_170 Hb_001892_040 Hb_001892_040 Hb_001277_390--Hb_001892_040 Hb_000270_590 Hb_000270_590 Hb_000905_130--Hb_000270_590 Hb_000375_210 Hb_000375_210 Hb_000905_130--Hb_000375_210 Hb_003050_210 Hb_003050_210 Hb_000905_130--Hb_003050_210 Hb_000296_030 Hb_000296_030 Hb_000905_130--Hb_000296_030 Hb_006846_050 Hb_006846_050 Hb_000905_130--Hb_006846_050 Hb_002232_340 Hb_002232_340 Hb_006618_060--Hb_002232_340 Hb_006618_060--Hb_006846_050 Hb_006603_010 Hb_006603_010 Hb_006618_060--Hb_006603_010 Hb_170597_010 Hb_170597_010 Hb_006618_060--Hb_170597_010 Hb_085158_010 Hb_085158_010 Hb_006618_060--Hb_085158_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.17558 36.6466 74.7782 2409.25 0.196806 7.41865
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.481301 0 0 0 21.5664

CAGE analysis