Hb_000917_010

Information

Type -
Description -
Location Contig917: 3675-6460
Sequence    

Annotation

kegg
ID rcu:RCOM_0581590
description hypothetical protein
nr
ID XP_002525300.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SH31
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0581590 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000917_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_159352_010 0.2219730459 - - hypothetical protein JCGZ_12393 [Jatropha curcas]
3 Hb_006745_060 0.2268311081 - - -
4 Hb_003376_290 0.228580234 - - hypothetical protein POPTR_0010s22880g [Populus trichocarpa]
5 Hb_004635_060 0.2399571769 - - hypothetical protein POPTR_0006s22850g [Populus trichocarpa]
6 Hb_001373_100 0.241007411 - - conserved hypothetical protein [Ricinus communis]
7 Hb_001159_200 0.253050923 - - PREDICTED: clp protease-related protein At4g12060, chloroplastic-like [Jatropha curcas]
8 Hb_004545_130 0.2566275178 - - uncharacterized protein LOC100305465 [Glycine max]
9 Hb_027346_020 0.2572163114 - - -
10 Hb_000106_100 0.2577230149 - - -
11 Hb_001163_090 0.2600368614 - - hypothetical protein POPTR_0009s14920g [Populus trichocarpa]
12 Hb_001434_070 0.260419076 - - PREDICTED: mitochondrial import inner membrane translocase subunit TIM8 [Jatropha curcas]
13 Hb_006342_020 0.2606054391 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
14 Hb_000819_070 0.2620108421 - - PREDICTED: dolichol-phosphate mannosyltransferase subunit 1 [Jatropha curcas]
15 Hb_006738_010 0.262520052 - - PREDICTED: uncharacterized protein LOC105634993 [Jatropha curcas]
16 Hb_003095_040 0.264222566 - - hypothetical protein CICLE_v10030016mg [Citrus clementina]
17 Hb_002112_010 0.2652069666 - - hypothetical protein POPTR_0001s45830g [Populus trichocarpa]
18 Hb_000453_300 0.2652088387 - - latex cystatin [Hevea brasiliensis]
19 Hb_002928_210 0.266900821 - - -
20 Hb_000032_350 0.268367335 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000917_010 Hb_000917_010 Hb_159352_010 Hb_159352_010 Hb_000917_010--Hb_159352_010 Hb_006745_060 Hb_006745_060 Hb_000917_010--Hb_006745_060 Hb_003376_290 Hb_003376_290 Hb_000917_010--Hb_003376_290 Hb_004635_060 Hb_004635_060 Hb_000917_010--Hb_004635_060 Hb_001373_100 Hb_001373_100 Hb_000917_010--Hb_001373_100 Hb_001159_200 Hb_001159_200 Hb_000917_010--Hb_001159_200 Hb_027346_020 Hb_027346_020 Hb_159352_010--Hb_027346_020 Hb_023051_020 Hb_023051_020 Hb_159352_010--Hb_023051_020 Hb_000720_190 Hb_000720_190 Hb_159352_010--Hb_000720_190 Hb_159352_010--Hb_001373_100 Hb_003226_240 Hb_003226_240 Hb_159352_010--Hb_003226_240 Hb_105602_020 Hb_105602_020 Hb_159352_010--Hb_105602_020 Hb_005539_210 Hb_005539_210 Hb_006745_060--Hb_005539_210 Hb_006745_060--Hb_004635_060 Hb_002492_020 Hb_002492_020 Hb_006745_060--Hb_002492_020 Hb_000300_400 Hb_000300_400 Hb_006745_060--Hb_000300_400 Hb_001959_260 Hb_001959_260 Hb_006745_060--Hb_001959_260 Hb_010166_020 Hb_010166_020 Hb_006745_060--Hb_010166_020 Hb_001434_070 Hb_001434_070 Hb_003376_290--Hb_001434_070 Hb_004209_030 Hb_004209_030 Hb_003376_290--Hb_004209_030 Hb_004545_130 Hb_004545_130 Hb_003376_290--Hb_004545_130 Hb_001307_210 Hb_001307_210 Hb_003376_290--Hb_001307_210 Hb_000635_080 Hb_000635_080 Hb_003376_290--Hb_000635_080 Hb_005000_180 Hb_005000_180 Hb_003376_290--Hb_005000_180 Hb_000281_230 Hb_000281_230 Hb_004635_060--Hb_000281_230 Hb_000819_070 Hb_000819_070 Hb_004635_060--Hb_000819_070 Hb_004474_010 Hb_004474_010 Hb_004635_060--Hb_004474_010 Hb_006351_110 Hb_006351_110 Hb_004635_060--Hb_006351_110 Hb_003349_070 Hb_003349_070 Hb_004635_060--Hb_003349_070 Hb_004223_260 Hb_004223_260 Hb_004635_060--Hb_004223_260 Hb_000329_660 Hb_000329_660 Hb_001373_100--Hb_000329_660 Hb_001373_100--Hb_003226_240 Hb_001842_080 Hb_001842_080 Hb_001373_100--Hb_001842_080 Hb_000613_160 Hb_000613_160 Hb_001373_100--Hb_000613_160 Hb_003095_070 Hb_003095_070 Hb_001373_100--Hb_003095_070 Hb_012022_100 Hb_012022_100 Hb_001373_100--Hb_012022_100 Hb_001369_400 Hb_001369_400 Hb_001159_200--Hb_001369_400 Hb_001159_200--Hb_000281_230 Hb_002876_370 Hb_002876_370 Hb_001159_200--Hb_002876_370 Hb_000788_080 Hb_000788_080 Hb_001159_200--Hb_000788_080 Hb_000318_490 Hb_000318_490 Hb_001159_200--Hb_000318_490 Hb_001863_420 Hb_001863_420 Hb_001159_200--Hb_001863_420
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.39487 0 0 0 0 0.208445
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.69346 5.8227 1.61499 1.94195 0.858642

CAGE analysis