Hb_006351_110

Information

Type -
Description -
Location Contig6351: 148993-150045
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID GO:0016740
description udp-glycosyltransferase 76c2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_51938: 150962-151222
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006351_110 0.0 - - -
2 Hb_010172_100 0.1080985756 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Populus euphratica]
3 Hb_004159_050 0.109514787 - - conserved hypothetical protein [Ricinus communis]
4 Hb_001102_250 0.1275235679 - - PREDICTED: E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 [Jatropha curcas]
5 Hb_000103_550 0.1322414551 - - PREDICTED: guanine nucleotide-binding protein subunit gamma 2 isoform X1 [Jatropha curcas]
6 Hb_000316_100 0.1350253087 - - protein with unknown function [Ricinus communis]
7 Hb_010594_030 0.1359449373 - - -
8 Hb_004635_060 0.1361807425 - - hypothetical protein POPTR_0006s22850g [Populus trichocarpa]
9 Hb_005908_040 0.136209505 - - hypothetical protein POPTR_0017s06850g [Populus trichocarpa]
10 Hb_003095_070 0.1369141291 - - hypothetical protein POPTR_0009s11230g [Populus trichocarpa]
11 Hb_004474_010 0.1494002324 - - unnamed protein product [Coffea canephora]
12 Hb_012395_210 0.1544062881 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000819_070 0.1547053945 - - PREDICTED: dolichol-phosphate mannosyltransferase subunit 1 [Jatropha curcas]
14 Hb_000059_350 0.1548668656 - - glutamate dehydrogenase, putative [Ricinus communis]
15 Hb_072912_020 0.1553210158 - - abhydrolase domain containing, putative [Ricinus communis]
16 Hb_000270_620 0.1582613969 - - PREDICTED: succinate dehydrogenase subunit 7B, mitochondrial-like isoform X1 [Jatropha curcas]
17 Hb_005137_020 0.1590049282 - - PREDICTED: uncharacterized protein LOC101759641 [Setaria italica]
18 Hb_003349_070 0.1598729706 - - PREDICTED: signal recognition particle 14 kDa protein [Gossypium raimondii]
19 Hb_034585_050 0.160532232 - - -
20 Hb_001842_080 0.1639832804 - - -

Gene co-expression network

sample Hb_006351_110 Hb_006351_110 Hb_010172_100 Hb_010172_100 Hb_006351_110--Hb_010172_100 Hb_004159_050 Hb_004159_050 Hb_006351_110--Hb_004159_050 Hb_001102_250 Hb_001102_250 Hb_006351_110--Hb_001102_250 Hb_000103_550 Hb_000103_550 Hb_006351_110--Hb_000103_550 Hb_000316_100 Hb_000316_100 Hb_006351_110--Hb_000316_100 Hb_010594_030 Hb_010594_030 Hb_006351_110--Hb_010594_030 Hb_005908_040 Hb_005908_040 Hb_010172_100--Hb_005908_040 Hb_005137_020 Hb_005137_020 Hb_010172_100--Hb_005137_020 Hb_010172_100--Hb_000316_100 Hb_001007_050 Hb_001007_050 Hb_010172_100--Hb_001007_050 Hb_001922_080 Hb_001922_080 Hb_010172_100--Hb_001922_080 Hb_000270_620 Hb_000270_620 Hb_004159_050--Hb_000270_620 Hb_183612_080 Hb_183612_080 Hb_004159_050--Hb_183612_080 Hb_004159_050--Hb_000103_550 Hb_000920_320 Hb_000920_320 Hb_004159_050--Hb_000920_320 Hb_000617_110 Hb_000617_110 Hb_004159_050--Hb_000617_110 Hb_072912_020 Hb_072912_020 Hb_001102_250--Hb_072912_020 Hb_003095_070 Hb_003095_070 Hb_001102_250--Hb_003095_070 Hb_000544_110 Hb_000544_110 Hb_001102_250--Hb_000544_110 Hb_005841_040 Hb_005841_040 Hb_001102_250--Hb_005841_040 Hb_001102_250--Hb_005137_020 Hb_004297_040 Hb_004297_040 Hb_001102_250--Hb_004297_040 Hb_000103_550--Hb_000270_620 Hb_000318_490 Hb_000318_490 Hb_000103_550--Hb_000318_490 Hb_001159_200 Hb_001159_200 Hb_000103_550--Hb_001159_200 Hb_000103_550--Hb_003095_070 Hb_001396_090 Hb_001396_090 Hb_000103_550--Hb_001396_090 Hb_000175_130 Hb_000175_130 Hb_000316_100--Hb_000175_130 Hb_001842_080 Hb_001842_080 Hb_000316_100--Hb_001842_080 Hb_000316_100--Hb_005908_040 Hb_027892_040 Hb_027892_040 Hb_000316_100--Hb_027892_040 Hb_034585_050 Hb_034585_050 Hb_010594_030--Hb_034585_050 Hb_010594_030--Hb_001102_250 Hb_002492_020 Hb_002492_020 Hb_010594_030--Hb_002492_020 Hb_005211_070 Hb_005211_070 Hb_010594_030--Hb_005211_070 Hb_012395_210 Hb_012395_210 Hb_010594_030--Hb_012395_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.63101 0 0.0607083 0.111925 0.824912 2.20027
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.2766 15.8174 5.24466 1.32623 0.138302

CAGE analysis