Hb_000836_350

Information

Type -
Description -
Location Contig836: 262664-264483
Sequence    

Annotation

kegg
ID vvi:100258452
description uncharacterized LOC100258452
nr
ID XP_012083321.1
description PREDICTED: uncharacterized protein LOC105642938 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JXF7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14343 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59944: 263120-263834 , PASA_asmbl_59946: 263526-264387
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000836_350 0.0 - - PREDICTED: uncharacterized protein LOC105642938 isoform X2 [Jatropha curcas]
2 Hb_155025_010 0.1059622724 - - PREDICTED: clustered mitochondria protein homolog [Jatropha curcas]
3 Hb_005235_070 0.1160270169 - - PREDICTED: plastid lipid-associated protein 3, chloroplastic [Jatropha curcas]
4 Hb_002107_050 0.1180380155 - - PREDICTED: prostaglandin E synthase 2 [Jatropha curcas]
5 Hb_006569_040 0.1198670817 transcription factor TF Family: GNAT PREDICTED: uncharacterized protein LOC105650906 [Jatropha curcas]
6 Hb_000140_440 0.1279691982 - - PREDICTED: probable hydroxyacylglutathione hydrolase 2, chloroplast [Jatropha curcas]
7 Hb_002218_020 0.1291303764 - - PREDICTED: AT-hook motif nuclear-localized protein 14 [Jatropha curcas]
8 Hb_003883_010 0.1299315607 - - PREDICTED: cold-inducible RNA-binding protein [Jatropha curcas]
9 Hb_000327_330 0.1303991083 - - conserved hypothetical protein [Ricinus communis]
10 Hb_004158_050 0.1304398658 - - hypothetical protein JCGZ_09026 [Jatropha curcas]
11 Hb_003925_060 0.1307918077 - - PREDICTED: uncharacterized protein LOC105645218 isoform X1 [Jatropha curcas]
12 Hb_000331_340 0.1320818148 - - PREDICTED: uncharacterized protein LOC105640234 [Jatropha curcas]
13 Hb_001430_020 0.1329633664 - - Actin-like ATPase superfamily protein isoform 1 [Theobroma cacao]
14 Hb_003529_140 0.1333825375 - - PREDICTED: nifU-like protein 2, chloroplastic [Jatropha curcas]
15 Hb_001250_040 0.1342656467 - - hypothetical protein CISIN_1g018444mg [Citrus sinensis]
16 Hb_001195_270 0.1350639516 - - PREDICTED: 5'-nucleotidase domain-containing protein 4 isoform X1 [Jatropha curcas]
17 Hb_007576_070 0.1365310328 - - PREDICTED: uncharacterized protein LOC105640040 isoform X3 [Jatropha curcas]
18 Hb_003376_390 0.1375803994 - - PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Jatropha curcas]
19 Hb_153553_040 0.1381886058 - - hypothetical protein JCGZ_19478 [Jatropha curcas]
20 Hb_102948_010 0.1383768323 transcription factor TF Family: ARID PREDICTED: AT-rich interactive domain-containing protein 5 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000836_350 Hb_000836_350 Hb_155025_010 Hb_155025_010 Hb_000836_350--Hb_155025_010 Hb_005235_070 Hb_005235_070 Hb_000836_350--Hb_005235_070 Hb_002107_050 Hb_002107_050 Hb_000836_350--Hb_002107_050 Hb_006569_040 Hb_006569_040 Hb_000836_350--Hb_006569_040 Hb_000140_440 Hb_000140_440 Hb_000836_350--Hb_000140_440 Hb_002218_020 Hb_002218_020 Hb_000836_350--Hb_002218_020 Hb_155025_010--Hb_000140_440 Hb_002265_010 Hb_002265_010 Hb_155025_010--Hb_002265_010 Hb_006120_040 Hb_006120_040 Hb_155025_010--Hb_006120_040 Hb_006555_040 Hb_006555_040 Hb_155025_010--Hb_006555_040 Hb_001322_020 Hb_001322_020 Hb_155025_010--Hb_001322_020 Hb_000555_020 Hb_000555_020 Hb_005235_070--Hb_000555_020 Hb_003883_010 Hb_003883_010 Hb_005235_070--Hb_003883_010 Hb_102948_010 Hb_102948_010 Hb_005235_070--Hb_102948_010 Hb_000107_340 Hb_000107_340 Hb_005235_070--Hb_000107_340 Hb_005235_070--Hb_002218_020 Hb_005235_070--Hb_002107_050 Hb_002107_050--Hb_003883_010 Hb_010620_050 Hb_010620_050 Hb_002107_050--Hb_010620_050 Hb_003071_030 Hb_003071_030 Hb_002107_050--Hb_003071_030 Hb_160271_010 Hb_160271_010 Hb_002107_050--Hb_160271_010 Hb_012779_080 Hb_012779_080 Hb_002107_050--Hb_012779_080 Hb_003529_140 Hb_003529_140 Hb_006569_040--Hb_003529_140 Hb_010174_090 Hb_010174_090 Hb_006569_040--Hb_010174_090 Hb_007283_010 Hb_007283_010 Hb_006569_040--Hb_007283_010 Hb_000826_030 Hb_000826_030 Hb_006569_040--Hb_000826_030 Hb_000663_020 Hb_000663_020 Hb_006569_040--Hb_000663_020 Hb_003752_070 Hb_003752_070 Hb_006569_040--Hb_003752_070 Hb_000140_440--Hb_006555_040 Hb_004994_080 Hb_004994_080 Hb_000140_440--Hb_004994_080 Hb_007451_040 Hb_007451_040 Hb_000140_440--Hb_007451_040 Hb_000140_440--Hb_002218_020 Hb_000181_060 Hb_000181_060 Hb_000140_440--Hb_000181_060 Hb_002218_020--Hb_102948_010 Hb_001430_020 Hb_001430_020 Hb_002218_020--Hb_001430_020 Hb_012438_030 Hb_012438_030 Hb_002218_020--Hb_012438_030 Hb_087313_010 Hb_087313_010 Hb_002218_020--Hb_087313_010 Hb_002218_020--Hb_000663_020 Hb_002218_020--Hb_003883_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.41802 12.7122 28.0389 10.0565 7.14702 4.72102
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.63918 6.46817 1.78536 1.95577 18.857

CAGE analysis