Hb_000836_200

Information

Type -
Description -
Location Contig836: 177989-179642
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000836_200 0.0 - - -
2 Hb_032299_050 0.2603370018 - - -
3 Hb_000889_090 0.3017915653 - - isocitrate lyase, putative [Ricinus communis]
4 Hb_004732_010 0.3220245404 - - -
5 Hb_001059_020 0.3303524878 - - PREDICTED: FBD-associated F-box protein At4g10400-like [Malus domestica]
6 Hb_002534_110 0.3462031501 transcription factor TF Family: RWP-RK transcription factor, putative [Ricinus communis]
7 Hb_006452_130 0.3469560072 - - -
8 Hb_047287_040 0.349783258 - - hypothetical protein PRUPE_ppa021229mg [Prunus persica]
9 Hb_002316_040 0.3644404401 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
10 Hb_135978_010 0.3701517003 - - hypothetical protein EUGRSUZ_J026621, partial [Eucalyptus grandis]
11 Hb_001623_030 0.3706791534 - - serine/threonine protein kinase, putative [Ricinus communis]
12 Hb_097730_010 0.3716303966 - - PREDICTED: uncharacterized protein LOC105803540 [Gossypium raimondii]
13 Hb_018247_010 0.3736669514 - - hypothetical protein JCGZ_26531 [Jatropha curcas]
14 Hb_003861_130 0.3743428447 - - -
15 Hb_000243_020 0.3814631722 - - -
16 Hb_004102_120 0.3828228984 - - -
17 Hb_000189_360 0.3834496981 - - Calcium-transporting ATPase 12, plasma membrane-type [Morus notabilis]
18 Hb_003371_240 0.383927999 - - hypothetical protein JCGZ_16702 [Jatropha curcas]
19 Hb_001102_170 0.3937753563 - - PREDICTED: protein FLX-like 1 [Jatropha curcas]
20 Hb_124480_010 0.4062468796 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]

Gene co-expression network

sample Hb_000836_200 Hb_000836_200 Hb_032299_050 Hb_032299_050 Hb_000836_200--Hb_032299_050 Hb_000889_090 Hb_000889_090 Hb_000836_200--Hb_000889_090 Hb_004732_010 Hb_004732_010 Hb_000836_200--Hb_004732_010 Hb_001059_020 Hb_001059_020 Hb_000836_200--Hb_001059_020 Hb_002534_110 Hb_002534_110 Hb_000836_200--Hb_002534_110 Hb_006452_130 Hb_006452_130 Hb_000836_200--Hb_006452_130 Hb_003371_240 Hb_003371_240 Hb_032299_050--Hb_003371_240 Hb_003861_130 Hb_003861_130 Hb_032299_050--Hb_003861_130 Hb_001623_030 Hb_001623_030 Hb_032299_050--Hb_001623_030 Hb_004102_120 Hb_004102_120 Hb_032299_050--Hb_004102_120 Hb_094245_010 Hb_094245_010 Hb_032299_050--Hb_094245_010 Hb_000889_090--Hb_002534_110 Hb_124480_010 Hb_124480_010 Hb_000889_090--Hb_124480_010 Hb_097730_010 Hb_097730_010 Hb_000889_090--Hb_097730_010 Hb_002289_020 Hb_002289_020 Hb_000889_090--Hb_002289_020 Hb_013272_010 Hb_013272_010 Hb_000889_090--Hb_013272_010 Hb_000829_080 Hb_000829_080 Hb_004732_010--Hb_000829_080 Hb_010288_040 Hb_010288_040 Hb_004732_010--Hb_010288_040 Hb_141383_010 Hb_141383_010 Hb_004732_010--Hb_141383_010 Hb_007451_060 Hb_007451_060 Hb_004732_010--Hb_007451_060 Hb_000189_360 Hb_000189_360 Hb_004732_010--Hb_000189_360 Hb_115784_010 Hb_115784_010 Hb_004732_010--Hb_115784_010 Hb_002316_040 Hb_002316_040 Hb_001059_020--Hb_002316_040 Hb_000186_210 Hb_000186_210 Hb_001059_020--Hb_000186_210 Hb_000014_140 Hb_000014_140 Hb_001059_020--Hb_000014_140 Hb_008453_070 Hb_008453_070 Hb_001059_020--Hb_008453_070 Hb_081745_010 Hb_081745_010 Hb_001059_020--Hb_081745_010 Hb_000277_060 Hb_000277_060 Hb_001059_020--Hb_000277_060 Hb_002534_110--Hb_124480_010 Hb_002534_110--Hb_002289_020 Hb_002534_110--Hb_097730_010 Hb_002534_110--Hb_013272_010 Hb_001301_190 Hb_001301_190 Hb_006452_130--Hb_001301_190 Hb_009012_010 Hb_009012_010 Hb_006452_130--Hb_009012_010 Hb_001660_090 Hb_001660_090 Hb_006452_130--Hb_001660_090 Hb_008064_010 Hb_008064_010 Hb_006452_130--Hb_008064_010 Hb_003849_260 Hb_003849_260 Hb_006452_130--Hb_003849_260 Hb_003906_190 Hb_003906_190 Hb_006452_130--Hb_003906_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.083942 0.285535 0 0 0 0.0747364
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.194708 0 0 0 0

CAGE analysis