Hb_000829_080

Information

Type -
Description -
Location Contig829: 123041-124825
Sequence    

Annotation

kegg
ID mtr:MTR_6g081210
description hypothetical protein
nr
ID XP_012080862.1
description PREDICTED: uncharacterized protein LOC105641027 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID E6NUA7
description JHL22C18.10 protein OS=Jatropha curcas GN=JHL22C18.10 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000829_080 0.0 - - PREDICTED: uncharacterized protein LOC105641027 [Jatropha curcas]
2 Hb_004732_010 0.1946755063 - - -
3 Hb_117240_010 0.2161587755 - - PREDICTED: uncharacterized protein LOC105775165 [Gossypium raimondii]
4 Hb_002180_010 0.2607269555 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
5 Hb_007451_060 0.2824113453 - - BAHD family acyltransferase, clade V, putative [Theobroma cacao]
6 Hb_010288_040 0.2856447815 - - PREDICTED: transmembrane protein 205-like [Eucalyptus grandis]
7 Hb_004788_040 0.2929538175 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
8 Hb_009393_170 0.3088558764 - - PREDICTED: vestitone reductase-like [Jatropha curcas]
9 Hb_054328_010 0.3089415075 - - hypothetical protein POPTR_0019s09820g [Populus trichocarpa]
10 Hb_000482_060 0.3151118157 transcription factor TF Family: LOB hypothetical protein JCGZ_07664 [Jatropha curcas]
11 Hb_021888_090 0.316279615 - - PREDICTED: putative CCR4-associated factor 1 homolog 8 isoform X1 [Malus domestica]
12 Hb_081745_010 0.3168799922 - - hypothetical protein CISIN_1g030953mg [Citrus sinensis]
13 Hb_141383_010 0.3221212612 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
14 Hb_001183_010 0.3246831702 - - -
15 Hb_000589_400 0.3253260459 - - ESC, putative [Ricinus communis]
16 Hb_085659_010 0.3261772686 - - PREDICTED: uncharacterized protein LOC104216799 [Nicotiana sylvestris]
17 Hb_013818_040 0.3293547988 - - PREDICTED: pleckstrin homology domain-containing family A member 8 [Jatropha curcas]
18 Hb_164945_040 0.3320607602 - - PREDICTED: uncharacterized protein LOC105628261 [Jatropha curcas]
19 Hb_009222_020 0.33364146 - - hypothetical protein AALP_AA5G087000 [Arabis alpina]
20 Hb_003100_010 0.3341028442 - - PREDICTED: uncharacterized protein LOC101217345 [Cucumis sativus]

Gene co-expression network

sample Hb_000829_080 Hb_000829_080 Hb_004732_010 Hb_004732_010 Hb_000829_080--Hb_004732_010 Hb_117240_010 Hb_117240_010 Hb_000829_080--Hb_117240_010 Hb_002180_010 Hb_002180_010 Hb_000829_080--Hb_002180_010 Hb_007451_060 Hb_007451_060 Hb_000829_080--Hb_007451_060 Hb_010288_040 Hb_010288_040 Hb_000829_080--Hb_010288_040 Hb_004788_040 Hb_004788_040 Hb_000829_080--Hb_004788_040 Hb_004732_010--Hb_010288_040 Hb_141383_010 Hb_141383_010 Hb_004732_010--Hb_141383_010 Hb_004732_010--Hb_007451_060 Hb_000189_360 Hb_000189_360 Hb_004732_010--Hb_000189_360 Hb_115784_010 Hb_115784_010 Hb_004732_010--Hb_115784_010 Hb_117240_010--Hb_002180_010 Hb_021888_090 Hb_021888_090 Hb_117240_010--Hb_021888_090 Hb_117240_010--Hb_004788_040 Hb_009012_010 Hb_009012_010 Hb_117240_010--Hb_009012_010 Hb_003100_010 Hb_003100_010 Hb_117240_010--Hb_003100_010 Hb_002180_010--Hb_010288_040 Hb_006922_060 Hb_006922_060 Hb_002180_010--Hb_006922_060 Hb_003398_030 Hb_003398_030 Hb_002180_010--Hb_003398_030 Hb_008289_050 Hb_008289_050 Hb_002180_010--Hb_008289_050 Hb_007451_060--Hb_000189_360 Hb_003992_110 Hb_003992_110 Hb_007451_060--Hb_003992_110 Hb_170207_010 Hb_170207_010 Hb_007451_060--Hb_170207_010 Hb_007451_060--Hb_141383_010 Hb_000529_240 Hb_000529_240 Hb_007451_060--Hb_000529_240 Hb_005779_050 Hb_005779_050 Hb_010288_040--Hb_005779_050 Hb_007105_010 Hb_007105_010 Hb_010288_040--Hb_007105_010 Hb_000454_060 Hb_000454_060 Hb_010288_040--Hb_000454_060 Hb_006907_120 Hb_006907_120 Hb_010288_040--Hb_006907_120 Hb_003623_070 Hb_003623_070 Hb_004788_040--Hb_003623_070 Hb_001635_050 Hb_001635_050 Hb_004788_040--Hb_001635_050 Hb_001269_690 Hb_001269_690 Hb_004788_040--Hb_001269_690 Hb_000140_410 Hb_000140_410 Hb_004788_040--Hb_000140_410 Hb_001529_050 Hb_001529_050 Hb_004788_040--Hb_001529_050 Hb_001104_240 Hb_001104_240 Hb_004788_040--Hb_001104_240
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0311445 0.0602221 0 0 0 0.0123988
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0285352 0.0224503 0 0.0268562 0

CAGE analysis