Hb_007451_060

Information

Type -
Description -
Location Contig7451: 33641-35148
Sequence    

Annotation

kegg
ID tcc:TCM_021186
description BAHD family acyltransferase, clade V, putative
nr
ID XP_007035554.1
description BAHD family acyltransferase, clade V, putative [Theobroma cacao]
swissprot
ID O24645
description Anthranilate N-benzoyltransferase protein 1 OS=Dianthus caryophyllus GN=HCBT1 PE=1 SV=1
trembl
ID A0A061EN55
description BAHD family acyltransferase, clade V, putative OS=Theobroma cacao GN=TCM_021186 PE=4 SV=1
Gene Ontology
ID GO:0016747
description omega-hydroxypalmitate o-feruloyl transferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007451_060 0.0 - - BAHD family acyltransferase, clade V, putative [Theobroma cacao]
2 Hb_000189_360 0.2287383038 - - Calcium-transporting ATPase 12, plasma membrane-type [Morus notabilis]
3 Hb_003992_110 0.2368977566 - - hypothetical protein VITISV_016971 [Vitis vinifera]
4 Hb_170207_010 0.2519561194 - - hypothetical protein JCGZ_01992 [Jatropha curcas]
5 Hb_141383_010 0.2757839014 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
6 Hb_000529_240 0.2776993847 - - -
7 Hb_000829_080 0.2824113453 - - PREDICTED: uncharacterized protein LOC105641027 [Jatropha curcas]
8 Hb_000179_150 0.2831443941 - - hypothetical protein ZEAMMB73_153699 [Zea mays]
9 Hb_004732_010 0.2908714109 - - -
10 Hb_001495_060 0.2922350452 - - PREDICTED: probable aldo-keto reductase 1 [Jatropha curcas]
11 Hb_008667_050 0.2924851657 - - PREDICTED: serine/threonine-protein kinase HT1-like [Malus domestica]
12 Hb_176052_010 0.2958913809 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
13 Hb_155092_010 0.2962626115 - - PREDICTED: putative CCR4-associated factor 1 homolog 8 [Jatropha curcas]
14 Hb_004296_020 0.2980267496 - - unnamed protein product [Coffea canephora]
15 Hb_035746_010 0.3037199866 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
16 Hb_009139_010 0.3039487856 - - putative Phospholipid-Diacylglycerol acyltransferase [Elaeis guineensis]
17 Hb_132998_020 0.3052748883 - - acyl carrier protein 1, chloroplastic-like [Jatropha curcas]
18 Hb_002180_010 0.3058237504 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
19 Hb_010288_040 0.3064595172 - - PREDICTED: transmembrane protein 205-like [Eucalyptus grandis]
20 Hb_114839_010 0.3082895494 - - -

Gene co-expression network

sample Hb_007451_060 Hb_007451_060 Hb_000189_360 Hb_000189_360 Hb_007451_060--Hb_000189_360 Hb_003992_110 Hb_003992_110 Hb_007451_060--Hb_003992_110 Hb_170207_010 Hb_170207_010 Hb_007451_060--Hb_170207_010 Hb_141383_010 Hb_141383_010 Hb_007451_060--Hb_141383_010 Hb_000529_240 Hb_000529_240 Hb_007451_060--Hb_000529_240 Hb_000829_080 Hb_000829_080 Hb_007451_060--Hb_000829_080 Hb_114839_010 Hb_114839_010 Hb_000189_360--Hb_114839_010 Hb_000189_360--Hb_003992_110 Hb_009139_010 Hb_009139_010 Hb_000189_360--Hb_009139_010 Hb_000713_020 Hb_000713_020 Hb_000189_360--Hb_000713_020 Hb_000179_150 Hb_000179_150 Hb_000189_360--Hb_000179_150 Hb_001369_260 Hb_001369_260 Hb_003992_110--Hb_001369_260 Hb_145890_010 Hb_145890_010 Hb_003992_110--Hb_145890_010 Hb_002741_030 Hb_002741_030 Hb_003992_110--Hb_002741_030 Hb_003992_110--Hb_000179_150 Hb_062006_010 Hb_062006_010 Hb_170207_010--Hb_062006_010 Hb_002180_010 Hb_002180_010 Hb_170207_010--Hb_002180_010 Hb_111347_010 Hb_111347_010 Hb_170207_010--Hb_111347_010 Hb_002014_110 Hb_002014_110 Hb_170207_010--Hb_002014_110 Hb_002615_100 Hb_002615_100 Hb_170207_010--Hb_002615_100 Hb_000931_030 Hb_000931_030 Hb_141383_010--Hb_000931_030 Hb_141383_010--Hb_114839_010 Hb_004732_010 Hb_004732_010 Hb_141383_010--Hb_004732_010 Hb_115784_010 Hb_115784_010 Hb_141383_010--Hb_115784_010 Hb_035746_010 Hb_035746_010 Hb_141383_010--Hb_035746_010 Hb_003209_030 Hb_003209_030 Hb_000529_240--Hb_003209_030 Hb_001495_060 Hb_001495_060 Hb_000529_240--Hb_001495_060 Hb_008667_050 Hb_008667_050 Hb_000529_240--Hb_008667_050 Hb_000331_320 Hb_000331_320 Hb_000529_240--Hb_000331_320 Hb_001047_140 Hb_001047_140 Hb_000529_240--Hb_001047_140 Hb_000453_210 Hb_000453_210 Hb_000529_240--Hb_000453_210 Hb_000829_080--Hb_004732_010 Hb_117240_010 Hb_117240_010 Hb_000829_080--Hb_117240_010 Hb_000829_080--Hb_002180_010 Hb_010288_040 Hb_010288_040 Hb_000829_080--Hb_010288_040 Hb_004788_040 Hb_004788_040 Hb_000829_080--Hb_004788_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0249101 0.0458607 0 0 0 0.0219752
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0571537 0.0898937 0 0.0181203 0

CAGE analysis