Hb_170207_010

Information

Type -
Description -
Location Contig170207: 108-507
Sequence    

Annotation

kegg
ID egr:104417505
description potassium transporter 19-like
nr
ID KDP39994.1
description hypothetical protein JCGZ_01992 [Jatropha curcas]
swissprot
ID Q9M7K4
description Potassium transporter 5 OS=Arabidopsis thaliana GN=POT5 PE=1 SV=1
trembl
ID A0A067L7B4
description Potassium transporter OS=Jatropha curcas GN=JCGZ_01992 PE=3 SV=1
Gene Ontology
ID GO:0016021
description potassium transporter 5-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_170207_010 0.0 - - hypothetical protein JCGZ_01992 [Jatropha curcas]
2 Hb_007451_060 0.2519561194 - - BAHD family acyltransferase, clade V, putative [Theobroma cacao]
3 Hb_062006_010 0.2966102322 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
4 Hb_002180_010 0.3153815939 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
5 Hb_111347_010 0.3176803579 - - PREDICTED: uncharacterized protein LOC105781565 [Gossypium raimondii]
6 Hb_002014_110 0.3235728733 - - -
7 Hb_002615_100 0.3294771291 - - -
8 Hb_004296_020 0.3309614926 - - unnamed protein product [Coffea canephora]
9 Hb_003992_110 0.3319216017 - - hypothetical protein VITISV_016971 [Vitis vinifera]
10 Hb_003225_030 0.3320552376 - - Pectinesterase-4 precursor, putative [Ricinus communis]
11 Hb_018869_020 0.3387227998 - - hypothetical protein POPTR_0001s08730g [Populus trichocarpa]
12 Hb_005701_030 0.3421230288 - - conserved hypothetical protein [Ricinus communis]
13 Hb_007101_010 0.342172413 - - PREDICTED: 2-hydroxyisoflavanone dehydratase-like [Jatropha curcas]
14 Hb_000077_240 0.3475321853 - - hypothetical protein PHAVU_011G114500g, partial [Phaseolus vulgaris]
15 Hb_003398_030 0.3520534416 - - PREDICTED: uncharacterized protein LOC104583892 [Brachypodium distachyon]
16 Hb_033772_050 0.354599087 transcription factor TF Family: MYB PREDICTED: myb-related protein A-like [Jatropha curcas]
17 Hb_000189_360 0.3638269145 - - Calcium-transporting ATPase 12, plasma membrane-type [Morus notabilis]
18 Hb_003158_020 0.3652621538 - - PREDICTED: uncharacterized protein LOC104647507 [Solanum lycopersicum]
19 Hb_004414_040 0.3669245861 transcription factor TF Family: ERF AP2 domain-containing transcription factor family protein [Populus trichocarpa]
20 Hb_176052_010 0.369977649 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]

Gene co-expression network

sample Hb_170207_010 Hb_170207_010 Hb_007451_060 Hb_007451_060 Hb_170207_010--Hb_007451_060 Hb_062006_010 Hb_062006_010 Hb_170207_010--Hb_062006_010 Hb_002180_010 Hb_002180_010 Hb_170207_010--Hb_002180_010 Hb_111347_010 Hb_111347_010 Hb_170207_010--Hb_111347_010 Hb_002014_110 Hb_002014_110 Hb_170207_010--Hb_002014_110 Hb_002615_100 Hb_002615_100 Hb_170207_010--Hb_002615_100 Hb_000189_360 Hb_000189_360 Hb_007451_060--Hb_000189_360 Hb_003992_110 Hb_003992_110 Hb_007451_060--Hb_003992_110 Hb_141383_010 Hb_141383_010 Hb_007451_060--Hb_141383_010 Hb_000529_240 Hb_000529_240 Hb_007451_060--Hb_000529_240 Hb_000829_080 Hb_000829_080 Hb_007451_060--Hb_000829_080 Hb_007101_010 Hb_007101_010 Hb_062006_010--Hb_007101_010 Hb_002272_010 Hb_002272_010 Hb_062006_010--Hb_002272_010 Hb_062006_010--Hb_002180_010 Hb_004296_020 Hb_004296_020 Hb_062006_010--Hb_004296_020 Hb_007181_040 Hb_007181_040 Hb_062006_010--Hb_007181_040 Hb_117240_010 Hb_117240_010 Hb_002180_010--Hb_117240_010 Hb_002180_010--Hb_000829_080 Hb_010288_040 Hb_010288_040 Hb_002180_010--Hb_010288_040 Hb_006922_060 Hb_006922_060 Hb_002180_010--Hb_006922_060 Hb_003398_030 Hb_003398_030 Hb_002180_010--Hb_003398_030 Hb_008289_050 Hb_008289_050 Hb_002180_010--Hb_008289_050 Hb_000077_240 Hb_000077_240 Hb_111347_010--Hb_000077_240 Hb_111347_010--Hb_003398_030 Hb_003158_020 Hb_003158_020 Hb_111347_010--Hb_003158_020 Hb_001022_040 Hb_001022_040 Hb_111347_010--Hb_001022_040 Hb_128051_010 Hb_128051_010 Hb_111347_010--Hb_128051_010 Hb_000853_130 Hb_000853_130 Hb_111347_010--Hb_000853_130 Hb_002014_110--Hb_000529_240 Hb_000275_040 Hb_000275_040 Hb_002014_110--Hb_000275_040 Hb_000987_090 Hb_000987_090 Hb_002014_110--Hb_000987_090 Hb_068804_040 Hb_068804_040 Hb_002014_110--Hb_068804_040 Hb_005048_060 Hb_005048_060 Hb_002014_110--Hb_005048_060 Hb_002240_080 Hb_002240_080 Hb_002615_100--Hb_002240_080 Hb_175450_010 Hb_175450_010 Hb_002615_100--Hb_175450_010 Hb_002228_090 Hb_002228_090 Hb_002615_100--Hb_002228_090 Hb_081207_010 Hb_081207_010 Hb_002615_100--Hb_081207_010 Hb_006588_010 Hb_006588_010 Hb_002615_100--Hb_006588_010 Hb_002259_050 Hb_002259_050 Hb_002615_100--Hb_002259_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.441759 0.439977 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.350589 1.10399 0 0.127539 0

CAGE analysis