Hb_128051_010

Information

Type -
Description -
Location Contig128051: 32-758
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_128051_010 0.0 - - -
2 Hb_109268_010 0.0975008884 - - PREDICTED: uncharacterized protein LOC105650977 [Jatropha curcas]
3 Hb_001022_060 0.1309006304 - - PREDICTED: alpha/beta hydrolase domain-containing protein 11 [Jatropha curcas]
4 Hb_003209_050 0.2232814255 - - hypothetical protein JCGZ_15683 [Jatropha curcas]
5 Hb_000077_240 0.248703294 - - hypothetical protein PHAVU_011G114500g, partial [Phaseolus vulgaris]
6 Hb_139138_010 0.2602250942 - - PREDICTED: uncharacterized protein LOC105650977 [Jatropha curcas]
7 Hb_003398_030 0.2644604269 - - PREDICTED: uncharacterized protein LOC104583892 [Brachypodium distachyon]
8 Hb_096224_020 0.2654773532 - - hypothetical protein JCGZ_06980 [Jatropha curcas]
9 Hb_111347_010 0.2660860339 - - PREDICTED: uncharacterized protein LOC105781565 [Gossypium raimondii]
10 Hb_005779_050 0.282487529 - - hypothetical protein JCGZ_14616 [Jatropha curcas]
11 Hb_007951_130 0.282895543 desease resistance Gene Name: UBN2_3 JHL25H03.6 [Jatropha curcas]
12 Hb_000693_020 0.289149113 - - PREDICTED: VQ motif-containing protein 11 [Jatropha curcas]
13 Hb_002282_040 0.2934734183 - - hypothetical protein VITISV_030841 [Vitis vinifera]
14 Hb_000749_080 0.3058223521 - - Alpha-expansin 12 precursor, putative [Ricinus communis]
15 Hb_006907_120 0.3060559203 - - PREDICTED: uncharacterized protein LOC103327233 [Prunus mume]
16 Hb_001022_040 0.3074385169 - - PREDICTED: uncharacterized protein LOC105634753 [Jatropha curcas]
17 Hb_006816_400 0.3085279996 - - PREDICTED: wall-associated receptor kinase-like 20 [Jatropha curcas]
18 Hb_000803_040 0.3140607741 - - -
19 Hb_092449_010 0.3285418652 - - -
20 Hb_000454_060 0.3289336086 - - Uncharacterized protein TCM_006778 [Theobroma cacao]

Gene co-expression network

sample Hb_128051_010 Hb_128051_010 Hb_109268_010 Hb_109268_010 Hb_128051_010--Hb_109268_010 Hb_001022_060 Hb_001022_060 Hb_128051_010--Hb_001022_060 Hb_003209_050 Hb_003209_050 Hb_128051_010--Hb_003209_050 Hb_000077_240 Hb_000077_240 Hb_128051_010--Hb_000077_240 Hb_139138_010 Hb_139138_010 Hb_128051_010--Hb_139138_010 Hb_003398_030 Hb_003398_030 Hb_128051_010--Hb_003398_030 Hb_109268_010--Hb_001022_060 Hb_005779_050 Hb_005779_050 Hb_109268_010--Hb_005779_050 Hb_096224_020 Hb_096224_020 Hb_109268_010--Hb_096224_020 Hb_109268_010--Hb_000077_240 Hb_109268_010--Hb_003398_030 Hb_001022_060--Hb_005779_050 Hb_001022_060--Hb_096224_020 Hb_001022_060--Hb_003209_050 Hb_001022_060--Hb_139138_010 Hb_002282_040 Hb_002282_040 Hb_003209_050--Hb_002282_040 Hb_003209_050--Hb_109268_010 Hb_003209_050--Hb_096224_020 Hb_000693_020 Hb_000693_020 Hb_003209_050--Hb_000693_020 Hb_000077_240--Hb_003398_030 Hb_006907_120 Hb_006907_120 Hb_000077_240--Hb_006907_120 Hb_111347_010 Hb_111347_010 Hb_000077_240--Hb_111347_010 Hb_007105_010 Hb_007105_010 Hb_000077_240--Hb_007105_010 Hb_007951_130 Hb_007951_130 Hb_139138_010--Hb_007951_130 Hb_005147_010 Hb_005147_010 Hb_139138_010--Hb_005147_010 Hb_011909_140 Hb_011909_140 Hb_139138_010--Hb_011909_140 Hb_001117_120 Hb_001117_120 Hb_139138_010--Hb_001117_120 Hb_000483_480 Hb_000483_480 Hb_139138_010--Hb_000483_480 Hb_003398_030--Hb_111347_010 Hb_003398_030--Hb_006907_120 Hb_008289_050 Hb_008289_050 Hb_003398_030--Hb_008289_050 Hb_003398_030--Hb_007105_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0799648 0.0297665 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.181674 0.1428 0 0.0291639 0

CAGE analysis