Hb_001022_060

Information

Type -
Description -
Location Contig1022: 84824-85450
Sequence    

Annotation

kegg
ID rcu:RCOM_0293430
description valacyclovir hydrolase, putative
nr
ID XP_012073000.1
description PREDICTED: alpha/beta hydrolase domain-containing protein 11 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KM72
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06785 PE=4 SV=1
Gene Ontology
ID GO:0005739
description alpha beta hydrolase domain-containing protein 11

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001022_060 0.0 - - PREDICTED: alpha/beta hydrolase domain-containing protein 11 [Jatropha curcas]
2 Hb_109268_010 0.0729049607 - - PREDICTED: uncharacterized protein LOC105650977 [Jatropha curcas]
3 Hb_128051_010 0.1309006304 - - -
4 Hb_005779_050 0.2337638193 - - hypothetical protein JCGZ_14616 [Jatropha curcas]
5 Hb_096224_020 0.289560749 - - hypothetical protein JCGZ_06980 [Jatropha curcas]
6 Hb_003209_050 0.3085049394 - - hypothetical protein JCGZ_15683 [Jatropha curcas]
7 Hb_139138_010 0.3099448548 - - PREDICTED: uncharacterized protein LOC105650977 [Jatropha curcas]
8 Hb_000077_240 0.3131281825 - - hypothetical protein PHAVU_011G114500g, partial [Phaseolus vulgaris]
9 Hb_007951_130 0.3151912935 desease resistance Gene Name: UBN2_3 JHL25H03.6 [Jatropha curcas]
10 Hb_006907_120 0.325281873 - - PREDICTED: uncharacterized protein LOC103327233 [Prunus mume]
11 Hb_000175_580 0.3299970545 transcription factor, desease resistance TF Family: C3H, Gene Name: zf-CCCH hypothetical protein POPTR_0013s00890g [Populus trichocarpa]
12 Hb_002282_040 0.331432521 - - hypothetical protein VITISV_030841 [Vitis vinifera]
13 Hb_003398_030 0.3331620508 - - PREDICTED: uncharacterized protein LOC104583892 [Brachypodium distachyon]
14 Hb_010174_010 0.333306044 - - PREDICTED: protein terminal ear1 [Jatropha curcas]
15 Hb_000693_020 0.3361744823 - - PREDICTED: VQ motif-containing protein 11 [Jatropha curcas]
16 Hb_011242_030 0.3425734602 - - -
17 Hb_000713_020 0.3447765586 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
18 Hb_011457_020 0.3451739689 - - PREDICTED: uncharacterized protein LOC105649960 [Jatropha curcas]
19 Hb_000062_410 0.3453674661 - - PREDICTED: uncharacterized protein LOC105644766 [Jatropha curcas]
20 Hb_006351_070 0.3458807983 - - heat-shock protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_001022_060 Hb_001022_060 Hb_109268_010 Hb_109268_010 Hb_001022_060--Hb_109268_010 Hb_128051_010 Hb_128051_010 Hb_001022_060--Hb_128051_010 Hb_005779_050 Hb_005779_050 Hb_001022_060--Hb_005779_050 Hb_096224_020 Hb_096224_020 Hb_001022_060--Hb_096224_020 Hb_003209_050 Hb_003209_050 Hb_001022_060--Hb_003209_050 Hb_139138_010 Hb_139138_010 Hb_001022_060--Hb_139138_010 Hb_109268_010--Hb_128051_010 Hb_109268_010--Hb_005779_050 Hb_109268_010--Hb_096224_020 Hb_000077_240 Hb_000077_240 Hb_109268_010--Hb_000077_240 Hb_003398_030 Hb_003398_030 Hb_109268_010--Hb_003398_030 Hb_128051_010--Hb_003209_050 Hb_128051_010--Hb_000077_240 Hb_128051_010--Hb_139138_010 Hb_128051_010--Hb_003398_030 Hb_010288_040 Hb_010288_040 Hb_005779_050--Hb_010288_040 Hb_007105_010 Hb_007105_010 Hb_005779_050--Hb_007105_010 Hb_006907_120 Hb_006907_120 Hb_005779_050--Hb_006907_120 Hb_005779_050--Hb_128051_010 Hb_002282_040 Hb_002282_040 Hb_096224_020--Hb_002282_040 Hb_096224_020--Hb_128051_010 Hb_004525_060 Hb_004525_060 Hb_096224_020--Hb_004525_060 Hb_096224_020--Hb_005779_050 Hb_003020_080 Hb_003020_080 Hb_096224_020--Hb_003020_080 Hb_003209_050--Hb_002282_040 Hb_003209_050--Hb_109268_010 Hb_003209_050--Hb_096224_020 Hb_000693_020 Hb_000693_020 Hb_003209_050--Hb_000693_020 Hb_007951_130 Hb_007951_130 Hb_139138_010--Hb_007951_130 Hb_005147_010 Hb_005147_010 Hb_139138_010--Hb_005147_010 Hb_011909_140 Hb_011909_140 Hb_139138_010--Hb_011909_140 Hb_001117_120 Hb_001117_120 Hb_139138_010--Hb_001117_120 Hb_000483_480 Hb_000483_480 Hb_139138_010--Hb_000483_480
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.239396 0.0626475 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.757067 0.297321 0 0.0633793 0

CAGE analysis