Hb_109268_010

Information

Type -
Description -
Location Contig109268: 92-556
Sequence    

Annotation

kegg
ID -
description -
nr
ID XP_012093340.1
description PREDICTED: uncharacterized protein LOC105650977 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067J8U8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00004 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_109268_010 0.0 - - PREDICTED: uncharacterized protein LOC105650977 [Jatropha curcas]
2 Hb_001022_060 0.0729049607 - - PREDICTED: alpha/beta hydrolase domain-containing protein 11 [Jatropha curcas]
3 Hb_128051_010 0.0975008884 - - -
4 Hb_005779_050 0.2012988555 - - hypothetical protein JCGZ_14616 [Jatropha curcas]
5 Hb_096224_020 0.2497502681 - - hypothetical protein JCGZ_06980 [Jatropha curcas]
6 Hb_000077_240 0.2586171876 - - hypothetical protein PHAVU_011G114500g, partial [Phaseolus vulgaris]
7 Hb_003398_030 0.2737298887 - - PREDICTED: uncharacterized protein LOC104583892 [Brachypodium distachyon]
8 Hb_003209_050 0.2800200836 - - hypothetical protein JCGZ_15683 [Jatropha curcas]
9 Hb_007951_130 0.2842722168 desease resistance Gene Name: UBN2_3 JHL25H03.6 [Jatropha curcas]
10 Hb_006907_120 0.2858941394 - - PREDICTED: uncharacterized protein LOC103327233 [Prunus mume]
11 Hb_139138_010 0.2884780857 - - PREDICTED: uncharacterized protein LOC105650977 [Jatropha curcas]
12 Hb_111347_010 0.3095321519 - - PREDICTED: uncharacterized protein LOC105781565 [Gossypium raimondii]
13 Hb_010288_040 0.3134623706 - - PREDICTED: transmembrane protein 205-like [Eucalyptus grandis]
14 Hb_002282_040 0.3135369549 - - hypothetical protein VITISV_030841 [Vitis vinifera]
15 Hb_000693_020 0.3184926688 - - PREDICTED: VQ motif-containing protein 11 [Jatropha curcas]
16 Hb_000454_060 0.3299143681 - - Uncharacterized protein TCM_006778 [Theobroma cacao]
17 Hb_004907_020 0.3347683083 - - PREDICTED: ABC transporter G family member 6-like [Jatropha curcas]
18 Hb_007105_010 0.3351022216 - - PREDICTED: uncharacterized protein LOC103455579 [Malus domestica]
19 Hb_000062_410 0.3368629477 - - PREDICTED: uncharacterized protein LOC105644766 [Jatropha curcas]
20 Hb_004525_060 0.3379645221 - - -

Gene co-expression network

sample Hb_109268_010 Hb_109268_010 Hb_001022_060 Hb_001022_060 Hb_109268_010--Hb_001022_060 Hb_128051_010 Hb_128051_010 Hb_109268_010--Hb_128051_010 Hb_005779_050 Hb_005779_050 Hb_109268_010--Hb_005779_050 Hb_096224_020 Hb_096224_020 Hb_109268_010--Hb_096224_020 Hb_000077_240 Hb_000077_240 Hb_109268_010--Hb_000077_240 Hb_003398_030 Hb_003398_030 Hb_109268_010--Hb_003398_030 Hb_001022_060--Hb_128051_010 Hb_001022_060--Hb_005779_050 Hb_001022_060--Hb_096224_020 Hb_003209_050 Hb_003209_050 Hb_001022_060--Hb_003209_050 Hb_139138_010 Hb_139138_010 Hb_001022_060--Hb_139138_010 Hb_128051_010--Hb_003209_050 Hb_128051_010--Hb_000077_240 Hb_128051_010--Hb_139138_010 Hb_128051_010--Hb_003398_030 Hb_010288_040 Hb_010288_040 Hb_005779_050--Hb_010288_040 Hb_007105_010 Hb_007105_010 Hb_005779_050--Hb_007105_010 Hb_006907_120 Hb_006907_120 Hb_005779_050--Hb_006907_120 Hb_005779_050--Hb_128051_010 Hb_002282_040 Hb_002282_040 Hb_096224_020--Hb_002282_040 Hb_096224_020--Hb_128051_010 Hb_004525_060 Hb_004525_060 Hb_096224_020--Hb_004525_060 Hb_096224_020--Hb_005779_050 Hb_003020_080 Hb_003020_080 Hb_096224_020--Hb_003020_080 Hb_000077_240--Hb_003398_030 Hb_000077_240--Hb_006907_120 Hb_111347_010 Hb_111347_010 Hb_000077_240--Hb_111347_010 Hb_000077_240--Hb_007105_010 Hb_003398_030--Hb_111347_010 Hb_003398_030--Hb_006907_120 Hb_008289_050 Hb_008289_050 Hb_003398_030--Hb_008289_050 Hb_003398_030--Hb_007105_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.468717 0.0998452 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.21295 0.59549 0 0.199545 0

CAGE analysis