Hb_141383_010

Information

Type -
Description -
Location Contig141383: 1333-2854
Sequence    

Annotation

kegg
ID pda:103715912
description uncharacterized LOC103715912
nr
ID XP_012068505.1
description PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID M1DF56
description Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400037635 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_141383_010 0.0 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
2 Hb_000931_030 0.2437394991 - - PREDICTED: uncharacterized protein LOC105130278 [Populus euphratica]
3 Hb_114839_010 0.2578105469 - - -
4 Hb_004732_010 0.2679089863 - - -
5 Hb_115784_010 0.2730925336 - - PREDICTED: uncharacterized protein LOC104227769, partial [Nicotiana sylvestris]
6 Hb_007451_060 0.2757839014 - - BAHD family acyltransferase, clade V, putative [Theobroma cacao]
7 Hb_035746_010 0.2861841248 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
8 Hb_000189_360 0.2868697111 - - Calcium-transporting ATPase 12, plasma membrane-type [Morus notabilis]
9 Hb_000381_080 0.2912529088 transcription factor TF Family: SNF2 PREDICTED: DNA repair protein RAD16 [Jatropha curcas]
10 Hb_070820_010 0.3060103248 - - hypothetical protein B456_008G232800 [Gossypium raimondii]
11 Hb_004098_030 0.3153308406 - - TMV resistance protein N, putative [Ricinus communis]
12 Hb_004586_450 0.317133421 - - -
13 Hb_007333_010 0.3173288423 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
14 Hb_171529_010 0.3195707153 - - -
15 Hb_081745_010 0.319674732 - - hypothetical protein CISIN_1g030953mg [Citrus sinensis]
16 Hb_145979_010 0.3199586826 - - PREDICTED: uncharacterized protein LOC105172316 [Sesamum indicum]
17 Hb_000347_510 0.3209584402 - - actin binding protein, putative [Ricinus communis]
18 Hb_000829_080 0.3221212612 - - PREDICTED: uncharacterized protein LOC105641027 [Jatropha curcas]
19 Hb_108884_010 0.3246216845 - - PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Prunus mume]
20 Hb_120221_010 0.3254537897 - - -

Gene co-expression network

sample Hb_141383_010 Hb_141383_010 Hb_000931_030 Hb_000931_030 Hb_141383_010--Hb_000931_030 Hb_114839_010 Hb_114839_010 Hb_141383_010--Hb_114839_010 Hb_004732_010 Hb_004732_010 Hb_141383_010--Hb_004732_010 Hb_115784_010 Hb_115784_010 Hb_141383_010--Hb_115784_010 Hb_007451_060 Hb_007451_060 Hb_141383_010--Hb_007451_060 Hb_035746_010 Hb_035746_010 Hb_141383_010--Hb_035746_010 Hb_000025_100 Hb_000025_100 Hb_000931_030--Hb_000025_100 Hb_000931_030--Hb_114839_010 Hb_001544_020 Hb_001544_020 Hb_000931_030--Hb_001544_020 Hb_171529_010 Hb_171529_010 Hb_000931_030--Hb_171529_010 Hb_126112_010 Hb_126112_010 Hb_000931_030--Hb_126112_010 Hb_000189_360 Hb_000189_360 Hb_114839_010--Hb_000189_360 Hb_000086_330 Hb_000086_330 Hb_114839_010--Hb_000086_330 Hb_042404_010 Hb_042404_010 Hb_114839_010--Hb_042404_010 Hb_004098_030 Hb_004098_030 Hb_114839_010--Hb_004098_030 Hb_070820_010 Hb_070820_010 Hb_114839_010--Hb_070820_010 Hb_000829_080 Hb_000829_080 Hb_004732_010--Hb_000829_080 Hb_010288_040 Hb_010288_040 Hb_004732_010--Hb_010288_040 Hb_004732_010--Hb_007451_060 Hb_004732_010--Hb_000189_360 Hb_004732_010--Hb_115784_010 Hb_115784_010--Hb_070820_010 Hb_115784_010--Hb_000086_330 Hb_002301_240 Hb_002301_240 Hb_115784_010--Hb_002301_240 Hb_115784_010--Hb_000931_030 Hb_007451_060--Hb_000189_360 Hb_003992_110 Hb_003992_110 Hb_007451_060--Hb_003992_110 Hb_170207_010 Hb_170207_010 Hb_007451_060--Hb_170207_010 Hb_000529_240 Hb_000529_240 Hb_007451_060--Hb_000529_240 Hb_007451_060--Hb_000829_080 Hb_003746_060 Hb_003746_060 Hb_035746_010--Hb_003746_060 Hb_021576_060 Hb_021576_060 Hb_035746_010--Hb_021576_060 Hb_007333_010 Hb_007333_010 Hb_035746_010--Hb_007333_010 Hb_005511_100 Hb_005511_100 Hb_035746_010--Hb_005511_100 Hb_029888_020 Hb_029888_020 Hb_035746_010--Hb_029888_020 Hb_003446_050 Hb_003446_050 Hb_035746_010--Hb_003446_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0154082 0.0307215 0 0 0 0.0540952
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0351397 0.0276437 0 0.0110508 0

CAGE analysis