Hb_000566_010

Information

Type -
Description -
Location Contig566: 15250-19638
Sequence    

Annotation

kegg
ID rcu:RCOM_1078990
description glucose-6-phosphate 1-dehydrogenase, putative (EC:1.1.1.49)
nr
ID AIE47267.1
description glucose-6-phosphate dehydrogenase [Hevea brasiliensis]
swissprot
ID Q43793
description Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1
trembl
ID A0A068LJJ9
description Glucose-6-phosphate 1-dehydrogenase OS=Hevea brasiliensis GN=G6PDH-2 PE=2 SV=1
Gene Ontology
ID GO:0004345
description glucose-6-phosphate 1- chloroplastic-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000566_010 0.0 - - glucose-6-phosphate dehydrogenase [Hevea brasiliensis]
2 Hb_000069_360 0.0870389671 - - conserved hypothetical protein [Ricinus communis]
3 Hb_003994_080 0.0923000484 - - PREDICTED: uncharacterized protein LOC105634384 [Jatropha curcas]
4 Hb_021409_070 0.0931853313 - - PREDICTED: transcription factor bHLH157 isoform X1 [Jatropha curcas]
5 Hb_002759_120 0.095761533 - - conserved hypothetical protein [Ricinus communis]
6 Hb_003752_090 0.1011378521 - - chitinase, putative [Ricinus communis]
7 Hb_005665_090 0.1020516008 - - PREDICTED: 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase isoform X2 [Jatropha curcas]
8 Hb_000414_080 0.1041647382 - - PREDICTED: triosephosphate isomerase, chloroplastic [Jatropha curcas]
9 Hb_000996_080 0.1066023639 - - PREDICTED: intracellular protein transport protein USO1 [Jatropha curcas]
10 Hb_000007_090 0.106843606 - - PREDICTED: LAG1 longevity assurance homolog 3 [Jatropha curcas]
11 Hb_032631_070 0.1082316753 - - PREDICTED: lisH domain and HEAT repeat-containing protein KIAA1468 homolog isoform X1 [Jatropha curcas]
12 Hb_000397_150 0.1106910759 - - PREDICTED: probable flavin-containing monooxygenase 1 [Jatropha curcas]
13 Hb_002249_080 0.1111368188 - - lysosomal alpha-mannosidase, putative [Ricinus communis]
14 Hb_000049_180 0.1113487872 - - aromatic amino acid decarboxylase, putative [Ricinus communis]
15 Hb_003680_220 0.111885821 - - hypothetical protein B456_002G243700 [Gossypium raimondii]
16 Hb_009288_040 0.1122706027 - - PREDICTED: uncharacterized protein LOC105648677 [Jatropha curcas]
17 Hb_005074_040 0.1136677462 - - ATP binding protein, putative [Ricinus communis]
18 Hb_008725_270 0.1137523199 - - PREDICTED: probable protein disulfide-isomerase A6 [Jatropha curcas]
19 Hb_000327_200 0.1145099593 - - glutathione-s-transferase omega, putative [Ricinus communis]
20 Hb_000689_050 0.1146963335 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000566_010 Hb_000566_010 Hb_000069_360 Hb_000069_360 Hb_000566_010--Hb_000069_360 Hb_003994_080 Hb_003994_080 Hb_000566_010--Hb_003994_080 Hb_021409_070 Hb_021409_070 Hb_000566_010--Hb_021409_070 Hb_002759_120 Hb_002759_120 Hb_000566_010--Hb_002759_120 Hb_003752_090 Hb_003752_090 Hb_000566_010--Hb_003752_090 Hb_005665_090 Hb_005665_090 Hb_000566_010--Hb_005665_090 Hb_000327_200 Hb_000327_200 Hb_000069_360--Hb_000327_200 Hb_000069_360--Hb_003994_080 Hb_000140_060 Hb_000140_060 Hb_000069_360--Hb_000140_060 Hb_000069_360--Hb_003752_090 Hb_003020_250 Hb_003020_250 Hb_000069_360--Hb_003020_250 Hb_003994_080--Hb_003752_090 Hb_005000_080 Hb_005000_080 Hb_003994_080--Hb_005000_080 Hb_001021_210 Hb_001021_210 Hb_003994_080--Hb_001021_210 Hb_138585_030 Hb_138585_030 Hb_003994_080--Hb_138585_030 Hb_000025_540 Hb_000025_540 Hb_003994_080--Hb_000025_540 Hb_010620_050 Hb_010620_050 Hb_003994_080--Hb_010620_050 Hb_003740_020 Hb_003740_020 Hb_021409_070--Hb_003740_020 Hb_003680_220 Hb_003680_220 Hb_021409_070--Hb_003680_220 Hb_000007_090 Hb_000007_090 Hb_021409_070--Hb_000007_090 Hb_021409_070--Hb_005665_090 Hb_000414_080 Hb_000414_080 Hb_021409_070--Hb_000414_080 Hb_002759_120--Hb_003752_090 Hb_000096_190 Hb_000096_190 Hb_002759_120--Hb_000096_190 Hb_042083_040 Hb_042083_040 Hb_002759_120--Hb_042083_040 Hb_158092_100 Hb_158092_100 Hb_002759_120--Hb_158092_100 Hb_002759_120--Hb_003994_080 Hb_009288_040 Hb_009288_040 Hb_003752_090--Hb_009288_040 Hb_003752_090--Hb_003020_250 Hb_003752_090--Hb_005665_090 Hb_001649_030 Hb_001649_030 Hb_003752_090--Hb_001649_030 Hb_012779_080 Hb_012779_080 Hb_005665_090--Hb_012779_080 Hb_005665_090--Hb_009288_040 Hb_001623_490 Hb_001623_490 Hb_005665_090--Hb_001623_490 Hb_000320_190 Hb_000320_190 Hb_005665_090--Hb_000320_190 Hb_000645_180 Hb_000645_180 Hb_005665_090--Hb_000645_180 Hb_005665_090--Hb_010620_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.50841 0.978328 3.48845 3.1152 0.494175 0.310852
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.858905 0.912361 0.545312 1.13551 3.43225

CAGE analysis