Hb_000310_070

Information

Type -
Description -
Location Contig310: 102232-107831
Sequence    

Annotation

kegg
ID smo:SELMODRAFT_413950
description hypothetical protein
nr
ID CDX98082.1
description BnaA06g08330D [Brassica napus]
swissprot
ID A1CLY7
description Ketocytochalasin monooxygenase OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=ccsB PE=1 SV=1
trembl
ID A0A078EAU4
description Flavin-containing monooxygenase OS=Brassica napus GN=BnaA06g08330D PE=3 SV=1
Gene Ontology
ID GO:0000166
description flavin-containing monooxygenase fmo gs-ox-like 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_32816: 103072-106716
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000310_070 0.0 - - BnaA06g08330D [Brassica napus]
2 Hb_000429_090 0.2008280115 - - PREDICTED: carboxyl-terminal-processing peptidase 3, chloroplastic [Jatropha curcas]
3 Hb_002936_080 0.2112404736 - - Protein bem46, putative [Ricinus communis]
4 Hb_000530_120 0.2582199393 - - copper transport protein ATOX1 [Hevea brasiliensis]
5 Hb_073490_020 0.2627988418 - - hypothetical protein PRUPE_ppa016333mg, partial [Prunus persica]
6 Hb_004162_260 0.2660577393 transcription factor TF Family: C2H2 conserved hypothetical protein [Ricinus communis]
7 Hb_091194_010 0.2708112697 - - hypothetical protein POPTR_0006s05430g [Populus trichocarpa]
8 Hb_001366_070 0.2716958276 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 4-like isoform X2 [Jatropha curcas]
9 Hb_001823_060 0.272379705 - - fructose-bisphosphate aldolase, putative [Ricinus communis]
10 Hb_001045_040 0.2756581786 - - PREDICTED: carbonyl reductase [NADPH] 2 [Jatropha curcas]
11 Hb_002888_010 0.2791696642 - - -
12 Hb_003849_270 0.2805149313 - - -
13 Hb_004218_210 0.2845063213 transcription factor TF Family: Orphans hypothetical protein JCGZ_24525 [Jatropha curcas]
14 Hb_005344_030 0.2851468616 - - PREDICTED: UDP-glycosyltransferase 74F2-like [Jatropha curcas]
15 Hb_000270_610 0.2852645417 - - PREDICTED: uncharacterized protein At5g50100, mitochondrial [Jatropha curcas]
16 Hb_162033_010 0.288865888 - - -
17 Hb_000608_460 0.29161805 - - -
18 Hb_004672_030 0.2923300018 - - proline oxidase [Manihot esculenta]
19 Hb_001493_120 0.2961568654 - - -
20 Hb_002809_150 0.298110027 transcription factor TF Family: M-type hypothetical protein CISIN_1g0283632mg, partial [Citrus sinensis]

Gene co-expression network

sample Hb_000310_070 Hb_000310_070 Hb_000429_090 Hb_000429_090 Hb_000310_070--Hb_000429_090 Hb_002936_080 Hb_002936_080 Hb_000310_070--Hb_002936_080 Hb_000530_120 Hb_000530_120 Hb_000310_070--Hb_000530_120 Hb_073490_020 Hb_073490_020 Hb_000310_070--Hb_073490_020 Hb_004162_260 Hb_004162_260 Hb_000310_070--Hb_004162_260 Hb_091194_010 Hb_091194_010 Hb_000310_070--Hb_091194_010 Hb_000429_090--Hb_091194_010 Hb_002809_150 Hb_002809_150 Hb_000429_090--Hb_002809_150 Hb_001493_120 Hb_001493_120 Hb_000429_090--Hb_001493_120 Hb_000429_090--Hb_000530_120 Hb_003849_270 Hb_003849_270 Hb_000429_090--Hb_003849_270 Hb_001136_060 Hb_001136_060 Hb_000429_090--Hb_001136_060 Hb_002936_080--Hb_004162_260 Hb_002936_080--Hb_000530_120 Hb_004672_030 Hb_004672_030 Hb_002936_080--Hb_004672_030 Hb_001045_040 Hb_001045_040 Hb_002936_080--Hb_001045_040 Hb_002609_040 Hb_002609_040 Hb_002936_080--Hb_002609_040 Hb_001823_060 Hb_001823_060 Hb_002936_080--Hb_001823_060 Hb_000530_120--Hb_003849_270 Hb_000318_160 Hb_000318_160 Hb_000530_120--Hb_000318_160 Hb_000445_490 Hb_000445_490 Hb_000530_120--Hb_000445_490 Hb_010402_050 Hb_010402_050 Hb_000530_120--Hb_010402_050 Hb_003050_280 Hb_003050_280 Hb_000530_120--Hb_003050_280 Hb_000270_610 Hb_000270_610 Hb_000530_120--Hb_000270_610 Hb_073490_020--Hb_003849_270 Hb_073490_020--Hb_001823_060 Hb_000723_340 Hb_000723_340 Hb_073490_020--Hb_000723_340 Hb_000574_460 Hb_000574_460 Hb_073490_020--Hb_000574_460 Hb_001252_220 Hb_001252_220 Hb_073490_020--Hb_001252_220 Hb_000056_070 Hb_000056_070 Hb_073490_020--Hb_000056_070 Hb_014834_010 Hb_014834_010 Hb_004162_260--Hb_014834_010 Hb_002260_030 Hb_002260_030 Hb_004162_260--Hb_002260_030 Hb_007520_010 Hb_007520_010 Hb_004162_260--Hb_007520_010 Hb_000914_170 Hb_000914_170 Hb_004162_260--Hb_000914_170 Hb_000935_030 Hb_000935_030 Hb_004162_260--Hb_000935_030 Hb_000429_100 Hb_000429_100 Hb_091194_010--Hb_000429_100 Hb_000169_140 Hb_000169_140 Hb_091194_010--Hb_000169_140 Hb_091194_010--Hb_001136_060 Hb_091194_010--Hb_002809_150 Hb_000705_290 Hb_000705_290 Hb_091194_010--Hb_000705_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0127624 0.0465215 0.0344074 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.245765 0.193339 0.103357 0 0.172567

CAGE analysis