Hb_000302_160

Information

Type -
Description -
Location Contig302: 107974-117000
Sequence    

Annotation

kegg
ID rcu:RCOM_1581950
description hypothetical protein
nr
ID XP_012090166.1
description PREDICTED: uncharacterized protein LOC105648403 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JEE6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26042 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_31782: 108019-108411 , PASA_asmbl_31784: 115660-115786 , PASA_asmbl_31785: 116888-117054
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000302_160 0.0 - - PREDICTED: uncharacterized protein LOC105648403 [Jatropha curcas]
2 Hb_089889_020 0.1512008725 transcription factor TF Family: B3 PREDICTED: B3 domain-containing protein At2g36080-like [Jatropha curcas]
3 Hb_001752_040 0.1609263949 - - hypothetical protein EUGRSUZ_C02580 [Eucalyptus grandis]
4 Hb_000365_160 0.1613158055 - - PREDICTED: serine/threonine-protein kinase At5g01020 [Jatropha curcas]
5 Hb_007123_070 0.1621231528 - - -
6 Hb_002411_130 0.1658063694 - - PREDICTED: cytosolic sulfotransferase 15-like [Populus euphratica]
7 Hb_000198_070 0.1685548594 - - PREDICTED: cyclin-dependent kinase inhibitor 7-like [Jatropha curcas]
8 Hb_019813_010 0.1714126859 - - PREDICTED: uncharacterized protein LOC105646947 [Jatropha curcas]
9 Hb_005085_020 0.1735573355 - - hypothetical protein B456_001G193200 [Gossypium raimondii]
10 Hb_015354_010 0.1744892852 - - PREDICTED: B2 protein [Jatropha curcas]
11 Hb_000016_030 0.1745071618 - - PREDICTED: hippocampus abundant transcript-like protein 1 isoform X1 [Jatropha curcas]
12 Hb_076874_010 0.1754167602 - - PREDICTED: ER lumen protein-retaining receptor [Jatropha curcas]
13 Hb_003038_220 0.1755245264 - - eukaryotic translation initiation factor 2 gamma subunit, putative [Ricinus communis]
14 Hb_000529_210 0.1766213045 - - PREDICTED: uncharacterized protein At4g38062 [Jatropha curcas]
15 Hb_000261_110 0.1770616845 - - PREDICTED: probable methionine--tRNA ligase [Jatropha curcas]
16 Hb_000025_050 0.1798178103 - - hypothetical protein POPTR_0003s13040g [Populus trichocarpa]
17 Hb_001882_110 0.1798830373 transcription factor TF Family: mTERF conserved hypothetical protein [Ricinus communis]
18 Hb_004127_010 0.1804771075 - - PREDICTED: probable RNA 3'-terminal phosphate cyclase-like protein [Malus domestica]
19 Hb_001910_020 0.1810702199 - - PREDICTED: ubiquitin-associated domain-containing protein 2 [Jatropha curcas]
20 Hb_000031_280 0.1815918457 - - -

Gene co-expression network

sample Hb_000302_160 Hb_000302_160 Hb_089889_020 Hb_089889_020 Hb_000302_160--Hb_089889_020 Hb_001752_040 Hb_001752_040 Hb_000302_160--Hb_001752_040 Hb_000365_160 Hb_000365_160 Hb_000302_160--Hb_000365_160 Hb_007123_070 Hb_007123_070 Hb_000302_160--Hb_007123_070 Hb_002411_130 Hb_002411_130 Hb_000302_160--Hb_002411_130 Hb_000198_070 Hb_000198_070 Hb_000302_160--Hb_000198_070 Hb_009838_130 Hb_009838_130 Hb_089889_020--Hb_009838_130 Hb_089889_020--Hb_007123_070 Hb_000996_180 Hb_000996_180 Hb_089889_020--Hb_000996_180 Hb_001910_020 Hb_001910_020 Hb_089889_020--Hb_001910_020 Hb_107847_010 Hb_107847_010 Hb_089889_020--Hb_107847_010 Hb_017259_010 Hb_017259_010 Hb_089889_020--Hb_017259_010 Hb_001752_040--Hb_002411_130 Hb_000025_050 Hb_000025_050 Hb_001752_040--Hb_000025_050 Hb_001767_120 Hb_001767_120 Hb_001752_040--Hb_001767_120 Hb_106411_010 Hb_106411_010 Hb_001752_040--Hb_106411_010 Hb_019813_010 Hb_019813_010 Hb_001752_040--Hb_019813_010 Hb_000803_110 Hb_000803_110 Hb_001752_040--Hb_000803_110 Hb_004920_060 Hb_004920_060 Hb_000365_160--Hb_004920_060 Hb_000365_160--Hb_001910_020 Hb_002307_350 Hb_002307_350 Hb_000365_160--Hb_002307_350 Hb_008246_030 Hb_008246_030 Hb_000365_160--Hb_008246_030 Hb_002411_180 Hb_002411_180 Hb_000365_160--Hb_002411_180 Hb_005408_020 Hb_005408_020 Hb_000365_160--Hb_005408_020 Hb_000152_230 Hb_000152_230 Hb_007123_070--Hb_000152_230 Hb_092337_020 Hb_092337_020 Hb_007123_070--Hb_092337_020 Hb_000175_090 Hb_000175_090 Hb_007123_070--Hb_000175_090 Hb_000563_330 Hb_000563_330 Hb_007123_070--Hb_000563_330 Hb_000529_210 Hb_000529_210 Hb_007123_070--Hb_000529_210 Hb_000159_110 Hb_000159_110 Hb_002411_130--Hb_000159_110 Hb_009119_030 Hb_009119_030 Hb_002411_130--Hb_009119_030 Hb_121467_010 Hb_121467_010 Hb_002411_130--Hb_121467_010 Hb_003376_070 Hb_003376_070 Hb_002411_130--Hb_003376_070 Hb_002411_130--Hb_001767_120 Hb_000606_080 Hb_000606_080 Hb_000198_070--Hb_000606_080 Hb_012132_040 Hb_012132_040 Hb_000198_070--Hb_012132_040 Hb_013691_020 Hb_013691_020 Hb_000198_070--Hb_013691_020 Hb_002067_020 Hb_002067_020 Hb_000198_070--Hb_002067_020 Hb_000364_080 Hb_000364_080 Hb_000198_070--Hb_000364_080 Hb_000523_090 Hb_000523_090 Hb_000198_070--Hb_000523_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.09278 0.971872 0.904342 0.921878 1.17246 2.23427
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.63333 0.871945 0.0467842 0.0795666 0.573014

CAGE analysis