Hb_000283_120

Information

Type -
Description -
Location Contig283: 118673-120068
Sequence    

Annotation

kegg
ID rcu:RCOM_0484400
description N-acetyltransferase, putative
nr
ID XP_012089278.1
description PREDICTED: uncharacterized protein LOC105647704 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JVX5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23507 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_29605: 120619-123446
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000283_120 0.0 - - PREDICTED: uncharacterized protein LOC105647704 [Jatropha curcas]
2 Hb_001191_130 0.2044079106 - - PREDICTED: uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic [Jatropha curcas]
3 Hb_065379_010 0.2303718166 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor GT-2-like [Jatropha curcas]
4 Hb_013877_020 0.2434541995 - - Cytochrome P450 [Theobroma cacao]
5 Hb_000988_030 0.2495718797 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000840_170 0.2519928313 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor GT-2-like [Jatropha curcas]
7 Hb_186725_010 0.2618405748 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
8 Hb_006634_020 0.2635512158 - - -
9 Hb_000538_260 0.2655075093 - - PREDICTED: serine/threonine-protein kinase HT1-like [Citrus sinensis]
10 Hb_000185_150 0.2659668221 - - Heme-binding protein, putative [Ricinus communis]
11 Hb_000347_270 0.270735988 - - PREDICTED: uncharacterized protein LOC105631376 [Jatropha curcas]
12 Hb_001865_040 0.2708894764 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]
13 Hb_003872_010 0.271458261 - - hypothetical protein PRUPE_ppa013215mg [Prunus persica]
14 Hb_011918_050 0.2743467262 - - -
15 Hb_005433_010 0.2749541295 - - PREDICTED: 66 kDa stress protein-like [Jatropha curcas]
16 Hb_000270_870 0.2756681487 - - PREDICTED: serine/threonine-protein kinase HT1-like [Jatropha curcas]
17 Hb_003849_040 0.277617771 - - PREDICTED: serine/threonine-protein kinase AFC2-like [Jatropha curcas]
18 Hb_028207_020 0.2780445736 - - PREDICTED: uncharacterized protein LOC105650315 isoform X2 [Jatropha curcas]
19 Hb_000156_160 0.2788097245 - - PREDICTED: urease accessory protein G [Jatropha curcas]
20 Hb_001021_160 0.2788875874 - - PREDICTED: homeobox protein LUMINIDEPENDENS [Jatropha curcas]

Gene co-expression network

sample Hb_000283_120 Hb_000283_120 Hb_001191_130 Hb_001191_130 Hb_000283_120--Hb_001191_130 Hb_065379_010 Hb_065379_010 Hb_000283_120--Hb_065379_010 Hb_013877_020 Hb_013877_020 Hb_000283_120--Hb_013877_020 Hb_000988_030 Hb_000988_030 Hb_000283_120--Hb_000988_030 Hb_000840_170 Hb_000840_170 Hb_000283_120--Hb_000840_170 Hb_186725_010 Hb_186725_010 Hb_000283_120--Hb_186725_010 Hb_001153_050 Hb_001153_050 Hb_001191_130--Hb_001153_050 Hb_002814_110 Hb_002814_110 Hb_001191_130--Hb_002814_110 Hb_002092_110 Hb_002092_110 Hb_001191_130--Hb_002092_110 Hb_002311_190 Hb_002311_190 Hb_001191_130--Hb_002311_190 Hb_000413_070 Hb_000413_070 Hb_001191_130--Hb_000413_070 Hb_006573_160 Hb_006573_160 Hb_001191_130--Hb_006573_160 Hb_065379_010--Hb_000840_170 Hb_065379_010--Hb_000988_030 Hb_000185_150 Hb_000185_150 Hb_065379_010--Hb_000185_150 Hb_012528_030 Hb_012528_030 Hb_065379_010--Hb_012528_030 Hb_044086_010 Hb_044086_010 Hb_065379_010--Hb_044086_010 Hb_004074_030 Hb_004074_030 Hb_065379_010--Hb_004074_030 Hb_176844_010 Hb_176844_010 Hb_013877_020--Hb_176844_010 Hb_001277_410 Hb_001277_410 Hb_013877_020--Hb_001277_410 Hb_020549_010 Hb_020549_010 Hb_013877_020--Hb_020549_010 Hb_004619_070 Hb_004619_070 Hb_013877_020--Hb_004619_070 Hb_000270_870 Hb_000270_870 Hb_013877_020--Hb_000270_870 Hb_000988_030--Hb_000185_150 Hb_010346_020 Hb_010346_020 Hb_000988_030--Hb_010346_020 Hb_003638_010 Hb_003638_010 Hb_000988_030--Hb_003638_010 Hb_000732_070 Hb_000732_070 Hb_000988_030--Hb_000732_070 Hb_000345_490 Hb_000345_490 Hb_000988_030--Hb_000345_490 Hb_000840_170--Hb_000185_150 Hb_000840_170--Hb_012528_030 Hb_000840_170--Hb_044086_010 Hb_000840_170--Hb_000988_030 Hb_005529_030 Hb_005529_030 Hb_000840_170--Hb_005529_030 Hb_031403_020 Hb_031403_020 Hb_186725_010--Hb_031403_020 Hb_000243_200 Hb_000243_200 Hb_186725_010--Hb_000243_200 Hb_005709_010 Hb_005709_010 Hb_186725_010--Hb_005709_010 Hb_000576_050 Hb_000576_050 Hb_186725_010--Hb_000576_050 Hb_004055_170 Hb_004055_170 Hb_186725_010--Hb_004055_170 Hb_005539_340 Hb_005539_340 Hb_186725_010--Hb_005539_340
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.45139 0.814327 0.736614 0.459969 0.370399 0.183069
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.476355 0.0535076 0 0.0433251 0.644054

CAGE analysis