Hb_000140_300

Information

Type -
Description -
Location Contig140: 280048-280743
Sequence    

Annotation

kegg
ID rcu:RCOM_1617010
description hypothetical protein
nr
ID XP_002511933.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q84JK8
description Probable membrane-associated kinase regulator 6 OS=Arabidopsis thaliana GN=MAKR6 PE=2 SV=1
trembl
ID B9RDZ4
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1617010 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000140_300 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_009079_010 0.1603662388 - - JHL18I08.8 [Jatropha curcas]
3 Hb_055276_010 0.1721864907 - - hypothetical protein POPTR_0003s02950g [Populus trichocarpa]
4 Hb_000729_040 0.1738223332 - - xyloglucan endotransglucosylase/hydrolase protein 10 precursor [Populus trichocarpa]
5 Hb_003754_010 0.1747537746 - - hypothetical protein POPTR_0019s09950g [Populus trichocarpa]
6 Hb_002681_150 0.1764553345 - - uridine cytidine kinase I, putative [Ricinus communis]
7 Hb_000997_220 0.1783041581 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA14-like [Jatropha curcas]
8 Hb_004957_010 0.1790540299 - - PREDICTED: probable aquaporin NIP-type [Prunus mume]
9 Hb_001308_010 0.1794491157 - - conserved hypothetical protein [Ricinus communis]
10 Hb_006651_020 0.1807003756 - - PREDICTED: protein disulfide isomerase-like 1-4 [Jatropha curcas]
11 Hb_000160_010 0.1823614909 - - PREDICTED: uncharacterized protein LOC105638816 [Jatropha curcas]
12 Hb_153544_020 0.1833002026 transcription factor TF Family: TCP PREDICTED: transcription factor TCP12 [Jatropha curcas]
13 Hb_000680_100 0.1838838286 - - WD-repeat protein, putative [Ricinus communis]
14 Hb_002757_030 0.1865868699 - - unnamed protein product [Vitis vinifera]
15 Hb_094938_010 0.1874508372 - - -
16 Hb_010833_010 0.1877440379 - - hypothetical protein JCGZ_05701 [Jatropha curcas]
17 Hb_004030_040 0.188504941 - - PREDICTED: protein NRT1/ PTR FAMILY 2.8 [Jatropha curcas]
18 Hb_005653_050 0.1893220214 - - PREDICTED: CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase [Jatropha curcas]
19 Hb_004225_010 0.1897123718 - - -
20 Hb_001856_250 0.1898081301 - - PREDICTED: phenolic glucoside malonyltransferase 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_000140_300 Hb_000140_300 Hb_009079_010 Hb_009079_010 Hb_000140_300--Hb_009079_010 Hb_055276_010 Hb_055276_010 Hb_000140_300--Hb_055276_010 Hb_000729_040 Hb_000729_040 Hb_000140_300--Hb_000729_040 Hb_003754_010 Hb_003754_010 Hb_000140_300--Hb_003754_010 Hb_002681_150 Hb_002681_150 Hb_000140_300--Hb_002681_150 Hb_000997_220 Hb_000997_220 Hb_000140_300--Hb_000997_220 Hb_009079_010--Hb_055276_010 Hb_009079_010--Hb_000997_220 Hb_004884_040 Hb_004884_040 Hb_009079_010--Hb_004884_040 Hb_031330_010 Hb_031330_010 Hb_009079_010--Hb_031330_010 Hb_012114_090 Hb_012114_090 Hb_009079_010--Hb_012114_090 Hb_000318_500 Hb_000318_500 Hb_009079_010--Hb_000318_500 Hb_001369_480 Hb_001369_480 Hb_055276_010--Hb_001369_480 Hb_005357_170 Hb_005357_170 Hb_055276_010--Hb_005357_170 Hb_055276_010--Hb_000997_220 Hb_055276_010--Hb_000318_500 Hb_001433_230 Hb_001433_230 Hb_055276_010--Hb_001433_230 Hb_001856_250 Hb_001856_250 Hb_000729_040--Hb_001856_250 Hb_000487_350 Hb_000487_350 Hb_000729_040--Hb_000487_350 Hb_027577_010 Hb_027577_010 Hb_000729_040--Hb_027577_010 Hb_000581_010 Hb_000581_010 Hb_000729_040--Hb_000581_010 Hb_000462_120 Hb_000462_120 Hb_000729_040--Hb_000462_120 Hb_000483_340 Hb_000483_340 Hb_000729_040--Hb_000483_340 Hb_004957_010 Hb_004957_010 Hb_003754_010--Hb_004957_010 Hb_153544_020 Hb_153544_020 Hb_003754_010--Hb_153544_020 Hb_001308_010 Hb_001308_010 Hb_003754_010--Hb_001308_010 Hb_003754_010--Hb_000997_220 Hb_010833_010 Hb_010833_010 Hb_003754_010--Hb_010833_010 Hb_006651_020 Hb_006651_020 Hb_003754_010--Hb_006651_020 Hb_015183_090 Hb_015183_090 Hb_002681_150--Hb_015183_090 Hb_000331_380 Hb_000331_380 Hb_002681_150--Hb_000331_380 Hb_000307_160 Hb_000307_160 Hb_002681_150--Hb_000307_160 Hb_002073_210 Hb_002073_210 Hb_002681_150--Hb_002073_210 Hb_004162_150 Hb_004162_150 Hb_002681_150--Hb_004162_150 Hb_000352_210 Hb_000352_210 Hb_002681_150--Hb_000352_210 Hb_000997_220--Hb_004957_010 Hb_000997_220--Hb_001308_010 Hb_000997_220--Hb_153544_020 Hb_000997_220--Hb_000483_340 Hb_000997_220--Hb_001856_250
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0801324 1.10667 0 0.0929212
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.253417

CAGE analysis