Hb_002681_150

Information

Type -
Description -
Location Contig2681: 113911-116787
Sequence    

Annotation

kegg
ID rcu:RCOM_1065250
description uridine cytidine kinase I, putative (EC:2.4.2.9 2.7.1.48)
nr
ID XP_002521493.1
description uridine cytidine kinase I, putative [Ricinus communis]
swissprot
ID Q9LTY6
description Uridine kinase-like protein 5 OS=Arabidopsis thaliana GN=UKL5 PE=2 SV=1
trembl
ID B9S674
description Uridine kinase OS=Ricinus communis GN=RCOM_1065250 PE=3 SV=1
Gene Ontology
ID GO:0004849
description uridine kinase-like protein 5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002681_150 0.0 - - uridine cytidine kinase I, putative [Ricinus communis]
2 Hb_015183_090 0.0924977369 - - PREDICTED: 3-ketoacyl-CoA synthase 21-like [Jatropha curcas]
3 Hb_000331_380 0.102817743 - - hypothetical protein POPTR_0012s09560g [Populus trichocarpa]
4 Hb_000307_160 0.1037301709 - - PREDICTED: uncharacterized protein At1g76070 [Jatropha curcas]
5 Hb_002073_210 0.1061000108 - - conserved hypothetical protein [Ricinus communis]
6 Hb_004162_150 0.1083897038 - - hypothetical protein POPTR_0009s00870g [Populus trichocarpa]
7 Hb_000352_210 0.1092267224 - - PREDICTED: xyloglucan endotransglucosylase/hydrolase 1 [Jatropha curcas]
8 Hb_001887_010 0.1105332668 - - mta/sah nucleosidase, putative [Ricinus communis]
9 Hb_000431_050 0.1151267671 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001634_050 0.1212042566 - - PREDICTED: fasciclin-like arabinogalactan protein 12 [Jatropha curcas]
11 Hb_001557_030 0.1215706537 - - hypothetical protein CICLE_v10005306mg [Citrus clementina]
12 Hb_151436_010 0.1229780609 - - PREDICTED: uncharacterized protein LOC105137019 [Populus euphratica]
13 Hb_006970_180 0.123058154 - - PREDICTED: DNA-damage-repair/toleration protein DRT100-like [Jatropha curcas]
14 Hb_022250_140 0.1239780716 - - Rhicadhesin receptor precursor, putative [Ricinus communis]
15 Hb_000107_240 0.125054691 - - organic anion transporter, putative [Ricinus communis]
16 Hb_000115_210 0.1251261261 transcription factor TF Family: bHLH PREDICTED: transcription factor BEE 3-like [Jatropha curcas]
17 Hb_006249_010 0.1258124369 - - hypothetical protein JCGZ_13152 [Jatropha curcas]
18 Hb_150179_010 0.1261422718 - - hypothetical protein JCGZ_21079 [Jatropha curcas]
19 Hb_003925_010 0.1265590954 - - Polygalacturonase precursor, putative [Ricinus communis]
20 Hb_003765_010 0.127257443 - - berberine bridge enzyme [Hevea brasiliensis]

Gene co-expression network

sample Hb_002681_150 Hb_002681_150 Hb_015183_090 Hb_015183_090 Hb_002681_150--Hb_015183_090 Hb_000331_380 Hb_000331_380 Hb_002681_150--Hb_000331_380 Hb_000307_160 Hb_000307_160 Hb_002681_150--Hb_000307_160 Hb_002073_210 Hb_002073_210 Hb_002681_150--Hb_002073_210 Hb_004162_150 Hb_004162_150 Hb_002681_150--Hb_004162_150 Hb_000352_210 Hb_000352_210 Hb_002681_150--Hb_000352_210 Hb_015183_090--Hb_004162_150 Hb_015183_090--Hb_000352_210 Hb_015183_090--Hb_000331_380 Hb_000431_050 Hb_000431_050 Hb_015183_090--Hb_000431_050 Hb_015183_090--Hb_000307_160 Hb_003152_010 Hb_003152_010 Hb_015183_090--Hb_003152_010 Hb_000331_380--Hb_000352_210 Hb_000331_380--Hb_000431_050 Hb_000331_380--Hb_002073_210 Hb_004396_020 Hb_004396_020 Hb_000331_380--Hb_004396_020 Hb_000392_080 Hb_000392_080 Hb_000331_380--Hb_000392_080 Hb_007007_140 Hb_007007_140 Hb_000331_380--Hb_007007_140 Hb_000307_160--Hb_004162_150 Hb_000485_050 Hb_000485_050 Hb_000307_160--Hb_000485_050 Hb_000107_240 Hb_000107_240 Hb_000307_160--Hb_000107_240 Hb_000868_020 Hb_000868_020 Hb_000307_160--Hb_000868_020 Hb_003925_010 Hb_003925_010 Hb_000307_160--Hb_003925_010 Hb_006249_010 Hb_006249_010 Hb_000307_160--Hb_006249_010 Hb_151436_010 Hb_151436_010 Hb_002073_210--Hb_151436_010 Hb_006970_180 Hb_006970_180 Hb_002073_210--Hb_006970_180 Hb_002073_210--Hb_000431_050 Hb_022250_140 Hb_022250_140 Hb_002073_210--Hb_022250_140 Hb_002073_210--Hb_000352_210 Hb_004162_150--Hb_000485_050 Hb_004162_150--Hb_003925_010 Hb_004162_150--Hb_000431_050 Hb_000115_210 Hb_000115_210 Hb_004162_150--Hb_000115_210 Hb_000352_210--Hb_000392_080 Hb_000352_210--Hb_000431_050 Hb_000352_210--Hb_004396_020 Hb_000352_210--Hb_003152_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0473021 0.782542 0 0.0155317
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.0569569

CAGE analysis