Hb_001308_010

Information

Type -
Description -
Location Contig1308: 24737-26247
Sequence    

Annotation

kegg
ID rcu:RCOM_0737410
description hypothetical protein
nr
ID XP_002527560.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SNJ1
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0737410 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001308_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_004957_010 0.032949347 - - PREDICTED: probable aquaporin NIP-type [Prunus mume]
3 Hb_004225_010 0.0397205146 - - -
4 Hb_005653_050 0.0414106937 - - PREDICTED: CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase [Jatropha curcas]
5 Hb_003754_010 0.0475513674 - - hypothetical protein POPTR_0019s09950g [Populus trichocarpa]
6 Hb_000997_220 0.0599718546 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA14-like [Jatropha curcas]
7 Hb_001373_170 0.0626573496 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 9 [Jatropha curcas]
8 Hb_029584_030 0.0687561249 - - hypothetical protein JCGZ_07310 [Jatropha curcas]
9 Hb_153544_020 0.0734808192 transcription factor TF Family: TCP PREDICTED: transcription factor TCP12 [Jatropha curcas]
10 Hb_006651_020 0.0762396046 - - PREDICTED: protein disulfide isomerase-like 1-4 [Jatropha curcas]
11 Hb_000664_010 0.0821935263 - - PREDICTED: histidine-containing phosphotransfer protein 4-like [Jatropha curcas]
12 Hb_001454_420 0.083224278 - - multidrug resistance pump, putative [Ricinus communis]
13 Hb_010833_010 0.0858214294 - - hypothetical protein JCGZ_05701 [Jatropha curcas]
14 Hb_150179_010 0.0863577582 - - hypothetical protein JCGZ_21079 [Jatropha curcas]
15 Hb_008008_040 0.0943877775 - - PREDICTED: auxin-induced protein 15A-like [Jatropha curcas]
16 Hb_011224_030 0.0963534314 - - PREDICTED: oligopeptide transporter 1-like isoform X1 [Jatropha curcas]
17 Hb_000227_290 0.0964669003 - - PREDICTED: uncharacterized protein LOC105631957 [Jatropha curcas]
18 Hb_009079_010 0.0969693293 - - JHL18I08.8 [Jatropha curcas]
19 Hb_001856_250 0.0972089003 - - PREDICTED: phenolic glucoside malonyltransferase 1-like [Jatropha curcas]
20 Hb_181908_010 0.0981911809 - - PREDICTED: UDP-glycosyltransferase 73C3 [Jatropha curcas]

Gene co-expression network

sample Hb_001308_010 Hb_001308_010 Hb_004957_010 Hb_004957_010 Hb_001308_010--Hb_004957_010 Hb_004225_010 Hb_004225_010 Hb_001308_010--Hb_004225_010 Hb_005653_050 Hb_005653_050 Hb_001308_010--Hb_005653_050 Hb_003754_010 Hb_003754_010 Hb_001308_010--Hb_003754_010 Hb_000997_220 Hb_000997_220 Hb_001308_010--Hb_000997_220 Hb_001373_170 Hb_001373_170 Hb_001308_010--Hb_001373_170 Hb_004957_010--Hb_003754_010 Hb_153544_020 Hb_153544_020 Hb_004957_010--Hb_153544_020 Hb_004957_010--Hb_000997_220 Hb_006651_020 Hb_006651_020 Hb_004957_010--Hb_006651_020 Hb_010833_010 Hb_010833_010 Hb_004957_010--Hb_010833_010 Hb_004225_010--Hb_005653_050 Hb_004225_010--Hb_001373_170 Hb_001454_420 Hb_001454_420 Hb_004225_010--Hb_001454_420 Hb_029584_030 Hb_029584_030 Hb_004225_010--Hb_029584_030 Hb_181908_010 Hb_181908_010 Hb_004225_010--Hb_181908_010 Hb_005653_050--Hb_001373_170 Hb_005653_050--Hb_001454_420 Hb_005653_050--Hb_181908_010 Hb_008008_040 Hb_008008_040 Hb_005653_050--Hb_008008_040 Hb_003754_010--Hb_153544_020 Hb_003754_010--Hb_000997_220 Hb_003754_010--Hb_010833_010 Hb_003754_010--Hb_006651_020 Hb_000997_220--Hb_153544_020 Hb_000483_340 Hb_000483_340 Hb_000997_220--Hb_000483_340 Hb_001856_250 Hb_001856_250 Hb_000997_220--Hb_001856_250 Hb_001373_170--Hb_001454_420 Hb_001373_170--Hb_008008_040 Hb_001373_170--Hb_181908_010 Hb_000445_410 Hb_000445_410 Hb_001373_170--Hb_000445_410
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0615774 0.61034 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.136403

CAGE analysis