Hb_008008_040

Information

Type -
Description -
Location Contig8008: 22140-22454
Sequence    

Annotation

kegg
ID tcc:TCM_006757
description SAUR family protein
nr
ID XP_012084419.1
description PREDICTED: auxin-induced protein 15A-like [Jatropha curcas]
swissprot
ID P33081
description Auxin-induced protein 15A OS=Glycine max PE=2 SV=1
trembl
ID A0A067JXT7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19628 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008008_040 0.0 - - PREDICTED: auxin-induced protein 15A-like [Jatropha curcas]
2 Hb_181908_010 0.0179211554 - - PREDICTED: UDP-glycosyltransferase 73C3 [Jatropha curcas]
3 Hb_001454_420 0.0261729347 - - multidrug resistance pump, putative [Ricinus communis]
4 Hb_001373_170 0.031844451 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 9 [Jatropha curcas]
5 Hb_000445_410 0.0441390788 - - hypothetical protein EUGRSUZ_F02776 [Eucalyptus grandis]
6 Hb_003793_010 0.0489776504 - - hypothetical protein JCGZ_27055 [Jatropha curcas]
7 Hb_003858_010 0.0521695303 - - xyloglucan endotransglucosylase/hydrolase [Gossypium hirsutum]
8 Hb_005653_050 0.0632168957 - - PREDICTED: CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase [Jatropha curcas]
9 Hb_103225_040 0.0701784342 transcription factor TF Family: Orphans PREDICTED: zinc finger protein CONSTANS-LIKE 12-like [Jatropha curcas]
10 Hb_152868_020 0.0706303276 - - RecName: Full=2-methylbutanal oxime monooxygenase; AltName: Full=Cytochrome P450 71E7 [Manihot esculenta]
11 Hb_004225_010 0.0715880821 - - -
12 Hb_142204_010 0.0733459489 - - pyruvate decarboxylase [Saccharum officinarum]
13 Hb_185608_010 0.082213563 - - hypothetical protein POPTR_0004s22210g [Populus trichocarpa]
14 Hb_093084_030 0.0873126424 - - oleosin2 [Plukenetia volubilis]
15 Hb_001308_010 0.0943877775 - - conserved hypothetical protein [Ricinus communis]
16 Hb_092010_010 0.0957228375 - - cysteine proteinase inhibitor 5-like [Cucumis sativus]
17 Hb_057862_010 0.096918839 - - protein binding protein, putative [Ricinus communis]
18 Hb_011344_040 0.0981923276 - - PREDICTED: 21 kDa protein [Jatropha curcas]
19 Hb_000227_360 0.098591987 - - PREDICTED: mavicyanin [Jatropha curcas]
20 Hb_033149_010 0.0987871594 - - PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]

Gene co-expression network

sample Hb_008008_040 Hb_008008_040 Hb_181908_010 Hb_181908_010 Hb_008008_040--Hb_181908_010 Hb_001454_420 Hb_001454_420 Hb_008008_040--Hb_001454_420 Hb_001373_170 Hb_001373_170 Hb_008008_040--Hb_001373_170 Hb_000445_410 Hb_000445_410 Hb_008008_040--Hb_000445_410 Hb_003793_010 Hb_003793_010 Hb_008008_040--Hb_003793_010 Hb_003858_010 Hb_003858_010 Hb_008008_040--Hb_003858_010 Hb_181908_010--Hb_001454_420 Hb_181908_010--Hb_001373_170 Hb_181908_010--Hb_003858_010 Hb_181908_010--Hb_000445_410 Hb_005653_050 Hb_005653_050 Hb_181908_010--Hb_005653_050 Hb_001454_420--Hb_001373_170 Hb_001454_420--Hb_005653_050 Hb_004225_010 Hb_004225_010 Hb_001454_420--Hb_004225_010 Hb_001454_420--Hb_003858_010 Hb_001373_170--Hb_005653_050 Hb_001373_170--Hb_004225_010 Hb_001373_170--Hb_000445_410 Hb_000445_410--Hb_003793_010 Hb_103225_040 Hb_103225_040 Hb_000445_410--Hb_103225_040 Hb_152868_020 Hb_152868_020 Hb_000445_410--Hb_152868_020 Hb_033149_010 Hb_033149_010 Hb_000445_410--Hb_033149_010 Hb_003793_010--Hb_103225_040 Hb_003793_010--Hb_152868_020 Hb_003793_010--Hb_033149_010 Hb_000007_190 Hb_000007_190 Hb_003793_010--Hb_000007_190 Hb_000227_360 Hb_000227_360 Hb_003858_010--Hb_000227_360 Hb_142204_010 Hb_142204_010 Hb_003858_010--Hb_142204_010 Hb_011344_040 Hb_011344_040 Hb_003858_010--Hb_011344_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.4801 3.27858 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 1.24357

CAGE analysis