Hb_000115_300

Information

Type -
Description -
Location Contig115: 333959-336792
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000115_300 0.0 - - -
2 Hb_000483_210 0.2438673978 - - hypothetical protein JCGZ_03497 [Jatropha curcas]
3 Hb_003589_070 0.2540807195 - - PREDICTED: uncharacterized protein LOC104242373 [Nicotiana sylvestris]
4 Hb_002184_100 0.3002166361 - - hypothetical protein PRUPE_ppa020120mg [Prunus persica]
5 Hb_002644_030 0.319129252 - - PREDICTED: E3 ubiquitin-protein ligase UPL5-like, partial [Eucalyptus grandis]
6 Hb_004881_100 0.3782366631 - - Phosphoribosyltransferase family protein isoform 4 [Theobroma cacao]
7 Hb_178607_010 0.3928664153 - - PREDICTED: uncharacterized protein LOC105789535 [Gossypium raimondii]
8 Hb_000567_160 0.3945422823 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Jatropha curcas]
9 Hb_006642_010 0.4056091601 - - -
10 Hb_003147_030 0.4059430045 transcription factor TF Family: Jumonji transcription factor, putative [Ricinus communis]
11 Hb_138358_010 0.4059607131 - - PREDICTED: glutamic acid-rich protein-like [Jatropha curcas]
12 Hb_004642_010 0.40598842 - - Integrase core domain, putative [Oryza sativa Japonica Group]
13 Hb_000270_570 0.4061906014 - - PREDICTED: peroxidase 65-like [Jatropha curcas]
14 Hb_004724_110 0.4062732236 - - alpha-1,2-fucosyltransferase [Populus tremula x Populus alba]
15 Hb_000922_230 0.4065669261 - - -
16 Hb_001768_030 0.4067308515 - - -
17 Hb_001827_020 0.4071186739 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
18 Hb_011269_050 0.4071990098 - - -
19 Hb_077421_010 0.4073988135 - - PREDICTED: uncharacterized protein LOC105781565 [Gossypium raimondii]
20 Hb_002028_080 0.4074221153 - - hypothetical protein JCGZ_07571 [Jatropha curcas]

Gene co-expression network

sample Hb_000115_300 Hb_000115_300 Hb_000483_210 Hb_000483_210 Hb_000115_300--Hb_000483_210 Hb_003589_070 Hb_003589_070 Hb_000115_300--Hb_003589_070 Hb_002184_100 Hb_002184_100 Hb_000115_300--Hb_002184_100 Hb_002644_030 Hb_002644_030 Hb_000115_300--Hb_002644_030 Hb_004881_100 Hb_004881_100 Hb_000115_300--Hb_004881_100 Hb_178607_010 Hb_178607_010 Hb_000115_300--Hb_178607_010 Hb_086639_130 Hb_086639_130 Hb_000483_210--Hb_086639_130 Hb_001477_140 Hb_001477_140 Hb_000483_210--Hb_001477_140 Hb_002053_120 Hb_002053_120 Hb_000483_210--Hb_002053_120 Hb_031136_020 Hb_031136_020 Hb_000483_210--Hb_031136_020 Hb_000340_090 Hb_000340_090 Hb_000483_210--Hb_000340_090 Hb_003589_070--Hb_002184_100 Hb_004117_300 Hb_004117_300 Hb_003589_070--Hb_004117_300 Hb_181476_010 Hb_181476_010 Hb_003589_070--Hb_181476_010 Hb_000917_140 Hb_000917_140 Hb_003589_070--Hb_000917_140 Hb_038005_010 Hb_038005_010 Hb_003589_070--Hb_038005_010 Hb_089173_010 Hb_089173_010 Hb_002184_100--Hb_089173_010 Hb_008370_010 Hb_008370_010 Hb_002184_100--Hb_008370_010 Hb_006806_010 Hb_006806_010 Hb_002184_100--Hb_006806_010 Hb_054362_010 Hb_054362_010 Hb_002184_100--Hb_054362_010 Hb_127993_010 Hb_127993_010 Hb_002184_100--Hb_127993_010 Hb_001506_010 Hb_001506_010 Hb_002644_030--Hb_001506_010 Hb_000331_150 Hb_000331_150 Hb_002644_030--Hb_000331_150 Hb_002644_030--Hb_004881_100 Hb_000504_080 Hb_000504_080 Hb_002644_030--Hb_000504_080 Hb_067188_010 Hb_067188_010 Hb_002644_030--Hb_067188_010 Hb_000512_070 Hb_000512_070 Hb_004881_100--Hb_000512_070 Hb_001242_090 Hb_001242_090 Hb_004881_100--Hb_001242_090 Hb_004103_030 Hb_004103_030 Hb_004881_100--Hb_004103_030 Hb_177179_010 Hb_177179_010 Hb_004881_100--Hb_177179_010 Hb_002289_130 Hb_002289_130 Hb_004881_100--Hb_002289_130 Hb_004881_100--Hb_001506_010 Hb_172112_010 Hb_172112_010 Hb_178607_010--Hb_172112_010 Hb_025457_010 Hb_025457_010 Hb_178607_010--Hb_025457_010 Hb_000590_040 Hb_000590_040 Hb_178607_010--Hb_000590_040 Hb_010317_020 Hb_010317_020 Hb_178607_010--Hb_010317_020 Hb_178607_010--Hb_067188_010 Hb_002232_450 Hb_002232_450 Hb_178607_010--Hb_002232_450
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.165334 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.108353 0.0982786 0

CAGE analysis