Hb_067188_010

Information

Type -
Description -
Location Contig67188: 1-626
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_067188_010 0.0 - - -
2 Hb_000038_030 0.2010189517 - - PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7-like [Glycine max]
3 Hb_004324_350 0.2196213169 - - PREDICTED: uncharacterized protein LOC103484146 [Cucumis melo]
4 Hb_099864_010 0.2233097955 - - Disease resistance protein RPM1, putative [Ricinus communis]
5 Hb_004306_070 0.2261609874 - - hypothetical protein 0_18789_01, partial [Pinus taeda]
6 Hb_000331_150 0.2292931851 - - WD-repeat protein, putative [Ricinus communis]
7 Hb_022148_010 0.2357594321 - - PREDICTED: uncharacterized protein LOC105638910 [Jatropha curcas]
8 Hb_182424_010 0.2423609686 - - PREDICTED: U-box domain-containing protein 51 [Jatropha curcas]
9 Hb_085863_020 0.2435278474 transcription factor TF Family: MYB-related PREDICTED: telomere repeat-binding factor 1 [Jatropha curcas]
10 Hb_011218_060 0.250339776 - - PREDICTED: dephospho-CoA kinase-like [Jatropha curcas]
11 Hb_000291_280 0.2568103333 - - PREDICTED: LOW QUALITY PROTEIN: myosin-11 [Jatropha curcas]
12 Hb_004650_020 0.2610663933 - - -
13 Hb_000590_040 0.2646132007 - - hypothetical protein MPER_09217 [Moniliophthora perniciosa FA553]
14 Hb_007753_010 0.2676415056 - - -
15 Hb_030736_010 0.2751696034 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001100_010 0.2758231361 - - F-box/FBD/LRR-repeat protein [Medicago truncatula]
17 Hb_000380_180 0.2766283595 - - kinase, putative [Ricinus communis]
18 Hb_127003_010 0.2774780046 - - PREDICTED: uncharacterized protein LOC105633613 [Jatropha curcas]
19 Hb_003209_020 0.2795976296 - - PREDICTED: 26S proteasome non-ATPase regulatory subunit 10 [Jatropha curcas]
20 Hb_001004_040 0.2815096195 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_067188_010 Hb_067188_010 Hb_000038_030 Hb_000038_030 Hb_067188_010--Hb_000038_030 Hb_004324_350 Hb_004324_350 Hb_067188_010--Hb_004324_350 Hb_099864_010 Hb_099864_010 Hb_067188_010--Hb_099864_010 Hb_004306_070 Hb_004306_070 Hb_067188_010--Hb_004306_070 Hb_000331_150 Hb_000331_150 Hb_067188_010--Hb_000331_150 Hb_022148_010 Hb_022148_010 Hb_067188_010--Hb_022148_010 Hb_002233_090 Hb_002233_090 Hb_000038_030--Hb_002233_090 Hb_011218_060 Hb_011218_060 Hb_000038_030--Hb_011218_060 Hb_000291_280 Hb_000291_280 Hb_000038_030--Hb_000291_280 Hb_001102_110 Hb_001102_110 Hb_000038_030--Hb_001102_110 Hb_000038_030--Hb_000331_150 Hb_000431_020 Hb_000431_020 Hb_000038_030--Hb_000431_020 Hb_000380_180 Hb_000380_180 Hb_004324_350--Hb_000380_180 Hb_001488_100 Hb_001488_100 Hb_004324_350--Hb_001488_100 Hb_001767_010 Hb_001767_010 Hb_004324_350--Hb_001767_010 Hb_002498_060 Hb_002498_060 Hb_004324_350--Hb_002498_060 Hb_002739_110 Hb_002739_110 Hb_004324_350--Hb_002739_110 Hb_000249_130 Hb_000249_130 Hb_004324_350--Hb_000249_130 Hb_182424_010 Hb_182424_010 Hb_099864_010--Hb_182424_010 Hb_038011_010 Hb_038011_010 Hb_099864_010--Hb_038011_010 Hb_099864_010--Hb_000431_020 Hb_099864_010--Hb_011218_060 Hb_127003_010 Hb_127003_010 Hb_099864_010--Hb_127003_010 Hb_011287_090 Hb_011287_090 Hb_099864_010--Hb_011287_090 Hb_000270_320 Hb_000270_320 Hb_004306_070--Hb_000270_320 Hb_001238_050 Hb_001238_050 Hb_004306_070--Hb_001238_050 Hb_030736_010 Hb_030736_010 Hb_004306_070--Hb_030736_010 Hb_000162_040 Hb_000162_040 Hb_004306_070--Hb_000162_040 Hb_004306_050 Hb_004306_050 Hb_004306_070--Hb_004306_050 Hb_000331_150--Hb_000291_280 Hb_003069_020 Hb_003069_020 Hb_000331_150--Hb_003069_020 Hb_000397_070 Hb_000397_070 Hb_000331_150--Hb_000397_070 Hb_000331_150--Hb_011218_060 Hb_085863_020 Hb_085863_020 Hb_022148_010--Hb_085863_020 Hb_022148_010--Hb_000291_280 Hb_010436_020 Hb_010436_020 Hb_022148_010--Hb_010436_020 Hb_000122_130 Hb_000122_130 Hb_022148_010--Hb_000122_130 Hb_010436_030 Hb_010436_030 Hb_022148_010--Hb_010436_030 Hb_000139_380 Hb_000139_380 Hb_022148_010--Hb_000139_380
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.252143 0 0.200617 0 0.856836 0.805254
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.117586 0.184786 1.43104 0.381442 0

CAGE analysis