Hb_031136_020

Information

Type -
Description -
Location Contig31136: 15871-16237
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_031136_020 0.0 - - -
2 Hb_000340_090 0.000410095 - - -
3 Hb_002053_120 0.0025956811 transcription factor TF Family: CSD PREDICTED: uncharacterized protein LOC105636942 [Jatropha curcas]
4 Hb_086639_130 0.0876187679 - - -
5 Hb_010435_020 0.1060575973 - - PREDICTED: uncharacterized protein LOC104216897 [Nicotiana sylvestris]
6 Hb_000427_120 0.1835560744 - - -
7 Hb_000483_210 0.2801087659 - - hypothetical protein JCGZ_03497 [Jatropha curcas]
8 Hb_001477_140 0.2891707376 - - o-methyltransferase, putative [Ricinus communis]
9 Hb_061637_010 0.2904347367 - - PREDICTED: uncharacterized protein LOC105638675 [Jatropha curcas]
10 Hb_021156_030 0.3056591185 - - hypothetical protein JCGZ_18422 [Jatropha curcas]
11 Hb_006355_050 0.3397206683 - - -
12 Hb_000038_190 0.3489961334 - - -
13 Hb_000046_150 0.3489961334 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
14 Hb_000047_120 0.3489961334 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000062_120 0.3489961334 - - hypothetical protein JCGZ_17895 [Jatropha curcas]
16 Hb_000094_140 0.3489961334 - - hypothetical protein POPTR_0007s09865g [Populus trichocarpa]
17 Hb_000100_080 0.3489961334 - - -
18 Hb_000120_830 0.3489961334 - - PREDICTED: uncharacterized protein LOC105634429 [Jatropha curcas]
19 Hb_000134_060 0.3489961334 - - PREDICTED: LOW QUALITY PROTEIN: extended synaptotagmin-1-like [Jatropha curcas]
20 Hb_000173_450 0.3489961334 - - -

Gene co-expression network

sample Hb_031136_020 Hb_031136_020 Hb_000340_090 Hb_000340_090 Hb_031136_020--Hb_000340_090 Hb_002053_120 Hb_002053_120 Hb_031136_020--Hb_002053_120 Hb_086639_130 Hb_086639_130 Hb_031136_020--Hb_086639_130 Hb_010435_020 Hb_010435_020 Hb_031136_020--Hb_010435_020 Hb_000427_120 Hb_000427_120 Hb_031136_020--Hb_000427_120 Hb_000483_210 Hb_000483_210 Hb_031136_020--Hb_000483_210 Hb_000340_090--Hb_002053_120 Hb_000340_090--Hb_086639_130 Hb_000340_090--Hb_010435_020 Hb_000340_090--Hb_000427_120 Hb_000340_090--Hb_000483_210 Hb_002053_120--Hb_086639_130 Hb_002053_120--Hb_010435_020 Hb_002053_120--Hb_000427_120 Hb_002053_120--Hb_000483_210 Hb_086639_130--Hb_010435_020 Hb_086639_130--Hb_000483_210 Hb_086639_130--Hb_000427_120 Hb_010435_020--Hb_000427_120 Hb_061637_010 Hb_061637_010 Hb_010435_020--Hb_061637_010 Hb_000427_120--Hb_061637_010 Hb_021156_030 Hb_021156_030 Hb_000427_120--Hb_021156_030 Hb_000115_300 Hb_000115_300 Hb_000483_210--Hb_000115_300 Hb_001477_140 Hb_001477_140 Hb_000483_210--Hb_001477_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.530373 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 1.8448 0 0

CAGE analysis