Hb_061637_010

Information

Type -
Description -
Location Contig61637: 6367-7896
Sequence    

Annotation

kegg
ID csv:101205308
description uncharacterized LOC101205308
nr
ID XP_012077902.1
description PREDICTED: uncharacterized protein LOC105638675 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A0B0NAW6
description Hexaprenyldihydroxybenzoate methyltransferase, mitochondrial-like protein OS=Gossypium arboreum GN=F383_13104 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_061637_010 0.0 - - PREDICTED: uncharacterized protein LOC105638675 [Jatropha curcas]
2 Hb_007177_010 0.1446935646 - - -
3 Hb_000572_050 0.1458652315 - - PREDICTED: transcriptional adapter ADA2b isoform X1 [Cicer arietinum]
4 Hb_005841_030 0.1460189853 - - -
5 Hb_005142_010 0.1462808875 - - -
6 Hb_001403_030 0.1501051461 - - -
7 Hb_000971_060 0.151310223 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
8 Hb_000201_020 0.1518702165 - - hypothetical protein CICLE_v10024145mg [Citrus clementina]
9 Hb_001545_250 0.1519813303 - - PREDICTED: uncharacterized protein LOC103936764 [Pyrus x bretschneideri]
10 Hb_010760_010 0.1547039273 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
11 Hb_070247_010 0.156688218 - - hypothetical protein [Pseudomonas tolaasii]
12 Hb_020818_010 0.1572700014 - - PREDICTED: uncharacterized protein LOC105648455 isoform X2 [Jatropha curcas]
13 Hb_000450_140 0.1581793593 - - hypothetical protein POPTR_0009s06810g [Populus trichocarpa]
14 Hb_012286_070 0.1582171246 - - PREDICTED: uncharacterized protein LOC105641750 [Jatropha curcas]
15 Hb_008839_030 0.1617561304 - - conserved hypothetical protein [Ricinus communis]
16 Hb_060455_010 0.1655597911 - - 50 kDa protein [Hevea brasiliensis]
17 Hb_005020_010 0.1872806665 - - -
18 Hb_000427_120 0.1885366718 - - -
19 Hb_000638_040 0.1986604308 transcription factor TF Family: NF-YB PREDICTED: nuclear transcription factor Y subunit B-7-like [Glycine max]
20 Hb_004785_010 0.1995721512 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]

Gene co-expression network

sample Hb_061637_010 Hb_061637_010 Hb_007177_010 Hb_007177_010 Hb_061637_010--Hb_007177_010 Hb_000572_050 Hb_000572_050 Hb_061637_010--Hb_000572_050 Hb_005841_030 Hb_005841_030 Hb_061637_010--Hb_005841_030 Hb_005142_010 Hb_005142_010 Hb_061637_010--Hb_005142_010 Hb_001403_030 Hb_001403_030 Hb_061637_010--Hb_001403_030 Hb_000971_060 Hb_000971_060 Hb_061637_010--Hb_000971_060 Hb_005020_010 Hb_005020_010 Hb_007177_010--Hb_005020_010 Hb_007177_010--Hb_000572_050 Hb_007177_010--Hb_001403_030 Hb_007177_010--Hb_000971_060 Hb_000201_020 Hb_000201_020 Hb_007177_010--Hb_000201_020 Hb_001545_250 Hb_001545_250 Hb_007177_010--Hb_001545_250 Hb_000572_050--Hb_005841_030 Hb_000572_050--Hb_005142_010 Hb_000572_050--Hb_001403_030 Hb_000572_050--Hb_000971_060 Hb_000572_050--Hb_000201_020 Hb_000572_050--Hb_001545_250 Hb_005841_030--Hb_005142_010 Hb_005841_030--Hb_001403_030 Hb_005841_030--Hb_000971_060 Hb_005841_030--Hb_000201_020 Hb_005841_030--Hb_001545_250 Hb_005142_010--Hb_001403_030 Hb_005142_010--Hb_000971_060 Hb_005142_010--Hb_000201_020 Hb_005142_010--Hb_001545_250 Hb_001403_030--Hb_000971_060 Hb_001403_030--Hb_000201_020 Hb_001403_030--Hb_001545_250 Hb_010760_010 Hb_010760_010 Hb_001403_030--Hb_010760_010 Hb_070247_010 Hb_070247_010 Hb_001403_030--Hb_070247_010 Hb_020818_010 Hb_020818_010 Hb_001403_030--Hb_020818_010 Hb_000971_060--Hb_000201_020 Hb_000971_060--Hb_001545_250 Hb_000971_060--Hb_010760_010 Hb_000971_060--Hb_070247_010 Hb_000971_060--Hb_020818_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.0184459 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.393346 0.0284151 0

CAGE analysis