Hb_001477_140

Information

Type -
Description -
Location Contig1477: 106621-121617
Sequence    

Annotation

kegg
ID rcu:RCOM_1171490
description o-methyltransferase, putative (EC:2.1.1.146)
nr
ID XP_002517834.1
description o-methyltransferase, putative [Ricinus communis]
swissprot
ID Q6VMW0
description 8-hydroxyquercetin 8-O-methyltransferase OS=Mentha piperita GN=OMT2 PE=1 SV=1
trembl
ID B9RVR5
description O-methyltransferase, putative OS=Ricinus communis GN=RCOM_1171490 PE=4 SV=1
Gene Ontology
ID GO:0008171
description trans-resveratrol di-o-methyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12071: 113371-114082
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001477_140 0.0 - - o-methyltransferase, putative [Ricinus communis]
2 Hb_061637_010 0.2475132615 - - PREDICTED: uncharacterized protein LOC105638675 [Jatropha curcas]
3 Hb_161929_010 0.2523331397 - - PREDICTED: uncharacterized protein LOC105650390, partial [Jatropha curcas]
4 Hb_000483_210 0.2580635536 - - hypothetical protein JCGZ_03497 [Jatropha curcas]
5 Hb_002522_020 0.2759122337 - - hypothetical protein B456_011G148700, partial [Gossypium raimondii]
6 Hb_010435_020 0.2854306236 - - PREDICTED: uncharacterized protein LOC104216897 [Nicotiana sylvestris]
7 Hb_074238_010 0.2862345518 - - PREDICTED: uncharacterized protein LOC105797726 [Gossypium raimondii]
8 Hb_000340_090 0.2890879343 - - -
9 Hb_031136_020 0.2891707376 - - -
10 Hb_002053_120 0.2897064163 transcription factor TF Family: CSD PREDICTED: uncharacterized protein LOC105636942 [Jatropha curcas]
11 Hb_154340_010 0.2981417891 - - truncated nitrate transporter [Fragaria vesca]
12 Hb_000964_060 0.3019293584 - - hypothetical protein POPTR_0009s06660g [Populus trichocarpa]
13 Hb_006355_050 0.3033986824 - - -
14 Hb_000427_120 0.305554258 - - -
15 Hb_000638_040 0.3107141199 transcription factor TF Family: NF-YB PREDICTED: nuclear transcription factor Y subunit B-7-like [Glycine max]
16 Hb_007177_010 0.3135044746 - - -
17 Hb_006806_010 0.3144644091 - - -
18 Hb_086639_130 0.3174101637 - - -
19 Hb_010417_010 0.3242367691 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
20 Hb_002073_120 0.3263185785 - - Adenine nucleotide alpha hydrolases-like superfamily protein [Theobroma cacao]

Gene co-expression network

sample Hb_001477_140 Hb_001477_140 Hb_061637_010 Hb_061637_010 Hb_001477_140--Hb_061637_010 Hb_161929_010 Hb_161929_010 Hb_001477_140--Hb_161929_010 Hb_000483_210 Hb_000483_210 Hb_001477_140--Hb_000483_210 Hb_002522_020 Hb_002522_020 Hb_001477_140--Hb_002522_020 Hb_010435_020 Hb_010435_020 Hb_001477_140--Hb_010435_020 Hb_074238_010 Hb_074238_010 Hb_001477_140--Hb_074238_010 Hb_007177_010 Hb_007177_010 Hb_061637_010--Hb_007177_010 Hb_000572_050 Hb_000572_050 Hb_061637_010--Hb_000572_050 Hb_005841_030 Hb_005841_030 Hb_061637_010--Hb_005841_030 Hb_005142_010 Hb_005142_010 Hb_061637_010--Hb_005142_010 Hb_001403_030 Hb_001403_030 Hb_061637_010--Hb_001403_030 Hb_000971_060 Hb_000971_060 Hb_061637_010--Hb_000971_060 Hb_008370_010 Hb_008370_010 Hb_161929_010--Hb_008370_010 Hb_005532_010 Hb_005532_010 Hb_161929_010--Hb_005532_010 Hb_003760_040 Hb_003760_040 Hb_161929_010--Hb_003760_040 Hb_005483_010 Hb_005483_010 Hb_161929_010--Hb_005483_010 Hb_021616_010 Hb_021616_010 Hb_161929_010--Hb_021616_010 Hb_000115_300 Hb_000115_300 Hb_000483_210--Hb_000115_300 Hb_086639_130 Hb_086639_130 Hb_000483_210--Hb_086639_130 Hb_002053_120 Hb_002053_120 Hb_000483_210--Hb_002053_120 Hb_031136_020 Hb_031136_020 Hb_000483_210--Hb_031136_020 Hb_000340_090 Hb_000340_090 Hb_000483_210--Hb_000340_090 Hb_088538_020 Hb_088538_020 Hb_002522_020--Hb_088538_020 Hb_001114_340 Hb_001114_340 Hb_002522_020--Hb_001114_340 Hb_010417_010 Hb_010417_010 Hb_002522_020--Hb_010417_010 Hb_000141_240 Hb_000141_240 Hb_002522_020--Hb_000141_240 Hb_002073_120 Hb_002073_120 Hb_002522_020--Hb_002073_120 Hb_000172_570 Hb_000172_570 Hb_002522_020--Hb_000172_570 Hb_000427_120 Hb_000427_120 Hb_010435_020--Hb_000427_120 Hb_010435_020--Hb_000340_090 Hb_010435_020--Hb_031136_020 Hb_010435_020--Hb_002053_120 Hb_010435_020--Hb_086639_130 Hb_010435_020--Hb_061637_010 Hb_000083_040 Hb_000083_040 Hb_074238_010--Hb_000083_040 Hb_006355_050 Hb_006355_050 Hb_074238_010--Hb_006355_050 Hb_154340_010 Hb_154340_010 Hb_074238_010--Hb_154340_010 Hb_000638_040 Hb_000638_040 Hb_074238_010--Hb_000638_040 Hb_000705_280 Hb_000705_280 Hb_074238_010--Hb_000705_280 Hb_000440_030 Hb_000440_030 Hb_074238_010--Hb_000440_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0184189 0.00759692 0 0.221925 0.929988 0.00805643
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.167365 0.0164614 4.75326 0.569411 0

CAGE analysis