Hb_181476_010

Information

Type -
Description -
Location Contig181476: 1742-2346
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_181476_010 0.0 - - -
2 Hb_004117_300 0.01133394 - - -
3 Hb_000917_140 0.0200214679 - - -
4 Hb_038005_010 0.0513221797 - - PREDICTED: thaumatin-like protein [Jatropha curcas]
5 Hb_002120_020 0.0712698928 - - hypothetical protein JCGZ_18787 [Jatropha curcas]
6 Hb_184484_010 0.0797628648 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
7 Hb_027846_010 0.0888296666 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
8 Hb_007945_040 0.1875543842 - - PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Jatropha curcas]
9 Hb_000982_040 0.2002153026 - - conserved hypothetical protein [Ricinus communis]
10 Hb_004994_060 0.2179460758 - - PREDICTED: BON1-associated protein 2-like [Jatropha curcas]
11 Hb_003494_170 0.2204681795 - - -
12 Hb_000017_010 0.2208257092 - - -
13 Hb_002028_080 0.2212191746 - - hypothetical protein JCGZ_07571 [Jatropha curcas]
14 Hb_077421_010 0.2214316617 - - PREDICTED: uncharacterized protein LOC105781565 [Gossypium raimondii]
15 Hb_011269_050 0.2232895869 - - -
16 Hb_001827_020 0.2240557861 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
17 Hb_001768_030 0.2279310948 - - -
18 Hb_000922_230 0.2296697261 - - -
19 Hb_004724_110 0.2329671901 - - alpha-1,2-fucosyltransferase [Populus tremula x Populus alba]
20 Hb_000270_570 0.2339434365 - - PREDICTED: peroxidase 65-like [Jatropha curcas]

Gene co-expression network

sample Hb_181476_010 Hb_181476_010 Hb_004117_300 Hb_004117_300 Hb_181476_010--Hb_004117_300 Hb_000917_140 Hb_000917_140 Hb_181476_010--Hb_000917_140 Hb_038005_010 Hb_038005_010 Hb_181476_010--Hb_038005_010 Hb_002120_020 Hb_002120_020 Hb_181476_010--Hb_002120_020 Hb_184484_010 Hb_184484_010 Hb_181476_010--Hb_184484_010 Hb_027846_010 Hb_027846_010 Hb_181476_010--Hb_027846_010 Hb_004117_300--Hb_000917_140 Hb_004117_300--Hb_038005_010 Hb_004117_300--Hb_002120_020 Hb_004117_300--Hb_184484_010 Hb_004117_300--Hb_027846_010 Hb_000917_140--Hb_038005_010 Hb_000917_140--Hb_002120_020 Hb_000917_140--Hb_184484_010 Hb_000917_140--Hb_027846_010 Hb_038005_010--Hb_002120_020 Hb_038005_010--Hb_184484_010 Hb_038005_010--Hb_027846_010 Hb_002120_020--Hb_184484_010 Hb_002120_020--Hb_027846_010 Hb_184484_010--Hb_027846_010 Hb_007945_040 Hb_007945_040 Hb_027846_010--Hb_007945_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.0458854 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.102657 0

CAGE analysis