Hb_000092_060

Information

Type -
Description -
Location Contig92: 61955-64074
Sequence    

Annotation

kegg
ID rcu:RCOM_0331930
description hypothetical protein
nr
ID XP_012087752.1
description PREDICTED: uncharacterized protein LOC105646505 [Jatropha curcas]
swissprot
ID Q28I38
description DnaJ homolog subfamily B member 14 OS=Xenopus tropicalis GN=dnajb14 PE=2 SV=1
trembl
ID A0A067JL33
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25528 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000092_060 0.0 - - PREDICTED: uncharacterized protein LOC105646505 [Jatropha curcas]
2 Hb_000011_440 0.0747692645 - - PREDICTED: GDSL esterase/lipase 1 [Populus euphratica]
3 Hb_001300_160 0.0864584089 - - PREDICTED: sodium/hydrogen exchanger 2-like [Jatropha curcas]
4 Hb_006915_010 0.11126423 - - PREDICTED: clustered mitochondria protein homolog [Jatropha curcas]
5 Hb_000914_190 0.1219009848 - - xanthine dehydrogenase, putative [Ricinus communis]
6 Hb_001584_050 0.1236224351 - - PREDICTED: NHL repeat-containing protein 2 isoform X1 [Jatropha curcas]
7 Hb_004291_050 0.124644609 - - hypothetical protein POPTR_0018s09540g [Populus trichocarpa]
8 Hb_002943_020 0.1259201975 - - hypothetical protein POPTR_0075s00240g, partial [Populus trichocarpa]
9 Hb_000107_540 0.1262805697 - - PREDICTED: uncharacterized protein LOC105635335 [Jatropha curcas]
10 Hb_004724_260 0.127420291 - - PREDICTED: 40S ribosomal protein S14-2-like [Gossypium raimondii]
11 Hb_001541_280 0.1305423267 - - phosphate transporter [Manihot esculenta]
12 Hb_000638_100 0.1310061817 - - PREDICTED: histone deacetylase 14 [Jatropha curcas]
13 Hb_002814_010 0.1323223112 - - PREDICTED: adenylate kinase 5, chloroplastic [Jatropha curcas]
14 Hb_002111_010 0.1323236739 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 [Jatropha curcas]
15 Hb_000270_640 0.1343794442 - - hypothetical protein POPTR_0012s07880g [Populus trichocarpa]
16 Hb_001652_130 0.1349964996 - - hypothetical protein B456_002G193900 [Gossypium raimondii]
17 Hb_027337_130 0.1354544849 - - PREDICTED: non-functional NADPH-dependent codeinone reductase 2-like [Jatropha curcas]
18 Hb_001377_210 0.1373503096 - - PREDICTED: clustered mitochondria protein homolog [Jatropha curcas]
19 Hb_000033_010 0.1381701397 - - Protein MLO, putative [Ricinus communis]
20 Hb_016924_010 0.138687759 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000092_060 Hb_000092_060 Hb_000011_440 Hb_000011_440 Hb_000092_060--Hb_000011_440 Hb_001300_160 Hb_001300_160 Hb_000092_060--Hb_001300_160 Hb_006915_010 Hb_006915_010 Hb_000092_060--Hb_006915_010 Hb_000914_190 Hb_000914_190 Hb_000092_060--Hb_000914_190 Hb_001584_050 Hb_001584_050 Hb_000092_060--Hb_001584_050 Hb_004291_050 Hb_004291_050 Hb_000092_060--Hb_004291_050 Hb_000011_440--Hb_004291_050 Hb_002111_010 Hb_002111_010 Hb_000011_440--Hb_002111_010 Hb_000441_080 Hb_000441_080 Hb_000011_440--Hb_000441_080 Hb_000011_440--Hb_001300_160 Hb_000483_440 Hb_000483_440 Hb_000011_440--Hb_000483_440 Hb_001345_040 Hb_001345_040 Hb_001300_160--Hb_001345_040 Hb_001300_160--Hb_002111_010 Hb_002943_020 Hb_002943_020 Hb_001300_160--Hb_002943_020 Hb_001300_160--Hb_001584_050 Hb_000638_100 Hb_000638_100 Hb_006915_010--Hb_000638_100 Hb_000041_250 Hb_000041_250 Hb_006915_010--Hb_000041_250 Hb_004162_250 Hb_004162_250 Hb_006915_010--Hb_004162_250 Hb_000107_540 Hb_000107_540 Hb_006915_010--Hb_000107_540 Hb_000679_320 Hb_000679_320 Hb_006915_010--Hb_000679_320 Hb_001541_280 Hb_001541_280 Hb_006915_010--Hb_001541_280 Hb_001377_210 Hb_001377_210 Hb_000914_190--Hb_001377_210 Hb_004242_200 Hb_004242_200 Hb_000914_190--Hb_004242_200 Hb_015978_090 Hb_015978_090 Hb_000914_190--Hb_015978_090 Hb_000914_190--Hb_006915_010 Hb_000914_190--Hb_000011_440 Hb_001584_050--Hb_000107_540 Hb_010080_070 Hb_010080_070 Hb_001584_050--Hb_010080_070 Hb_001584_050--Hb_001377_210 Hb_002333_040 Hb_002333_040 Hb_001584_050--Hb_002333_040 Hb_001257_110 Hb_001257_110 Hb_001584_050--Hb_001257_110 Hb_001584_050--Hb_000011_440 Hb_004979_080 Hb_004979_080 Hb_004291_050--Hb_004979_080 Hb_004979_070 Hb_004979_070 Hb_004291_050--Hb_004979_070 Hb_007904_110 Hb_007904_110 Hb_004291_050--Hb_007904_110 Hb_000644_010 Hb_000644_010 Hb_004291_050--Hb_000644_010 Hb_027337_130 Hb_027337_130 Hb_004291_050--Hb_027337_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0531508 0.671988 1.73458 1.11982 0.0196527 0.116425
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0461085 0.0181396 0 0.880606 5.862

CAGE analysis