Hb_000069_710

Information

Type -
Description -
Location Contig69: 728322-729670
Sequence    

Annotation

kegg
ID rcu:RCOM_1617350
description hypothetical protein
nr
ID XP_012083264.1
description PREDICTED: uncharacterized protein LOC105642890 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JXB4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14298 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000069_710 0.0 - - PREDICTED: uncharacterized protein LOC105642890 [Jatropha curcas]
2 Hb_001143_190 0.1454261318 - - PREDICTED: uncharacterized protein LOC105638976 [Jatropha curcas]
3 Hb_000352_120 0.1547192813 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105630380 [Jatropha curcas]
4 Hb_001482_040 0.1560488363 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000019_150 0.1586523084 - - PREDICTED: uncharacterized protein LOC105630208 [Jatropha curcas]
6 Hb_000056_040 0.1605530373 - - PREDICTED: protein IQ-DOMAIN 31 [Jatropha curcas]
7 Hb_000397_120 0.1626992887 - - PREDICTED: uncharacterized protein LOC105641234 [Jatropha curcas]
8 Hb_000300_690 0.1677738327 - - hypothetical protein JCGZ_02719 [Jatropha curcas]
9 Hb_002078_160 0.1707334236 - - PREDICTED: probable arabinosyltransferase ARAD1 [Jatropha curcas]
10 Hb_107495_040 0.1748006608 - - PREDICTED: 12-oxophytodienoate reductase 2-like [Citrus sinensis]
11 Hb_003206_090 0.1759612773 - - PREDICTED: protein trichome birefringence-like 5 [Jatropha curcas]
12 Hb_007904_210 0.1762316257 - - PREDICTED: oxysterol-binding protein-related protein 1D [Jatropha curcas]
13 Hb_017110_010 0.1765330514 transcription factor TF Family: TRAF PREDICTED: BTB/POZ domain-containing protein At1g55760 [Jatropha curcas]
14 Hb_090051_030 0.1828182307 - - PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Jatropha curcas]
15 Hb_001662_060 0.1834184034 - - SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein isoform 1 [Theobroma cacao]
16 Hb_002248_110 0.1868977835 - - hypothetical protein POPTR_0001s41050g [Populus trichocarpa]
17 Hb_011671_080 0.187356626 - - PREDICTED: leucine-rich repeat receptor-like protein kinase TDR [Jatropha curcas]
18 Hb_000370_020 0.1879935774 - - conserved hypothetical protein [Ricinus communis]
19 Hb_013399_080 0.1881179224 - - PREDICTED: protein Brevis radix-like 2 [Jatropha curcas]
20 Hb_000025_030 0.1883207503 - - transcription factor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000069_710 Hb_000069_710 Hb_001143_190 Hb_001143_190 Hb_000069_710--Hb_001143_190 Hb_000352_120 Hb_000352_120 Hb_000069_710--Hb_000352_120 Hb_001482_040 Hb_001482_040 Hb_000069_710--Hb_001482_040 Hb_000019_150 Hb_000019_150 Hb_000069_710--Hb_000019_150 Hb_000056_040 Hb_000056_040 Hb_000069_710--Hb_000056_040 Hb_000397_120 Hb_000397_120 Hb_000069_710--Hb_000397_120 Hb_001143_190--Hb_000019_150 Hb_002809_050 Hb_002809_050 Hb_001143_190--Hb_002809_050 Hb_002909_140 Hb_002909_140 Hb_001143_190--Hb_002909_140 Hb_001004_070 Hb_001004_070 Hb_001143_190--Hb_001004_070 Hb_007416_330 Hb_007416_330 Hb_001143_190--Hb_007416_330 Hb_000025_030 Hb_000025_030 Hb_001143_190--Hb_000025_030 Hb_000352_120--Hb_001004_070 Hb_000062_540 Hb_000062_540 Hb_000352_120--Hb_000062_540 Hb_001936_130 Hb_001936_130 Hb_000352_120--Hb_001936_130 Hb_003206_090 Hb_003206_090 Hb_000352_120--Hb_003206_090 Hb_001269_330 Hb_001269_330 Hb_000352_120--Hb_001269_330 Hb_027380_220 Hb_027380_220 Hb_000352_120--Hb_027380_220 Hb_002304_040 Hb_002304_040 Hb_001482_040--Hb_002304_040 Hb_000295_080 Hb_000295_080 Hb_001482_040--Hb_000295_080 Hb_001482_040--Hb_000352_120 Hb_000370_020 Hb_000370_020 Hb_001482_040--Hb_000370_020 Hb_090051_030 Hb_090051_030 Hb_001482_040--Hb_090051_030 Hb_001482_040--Hb_027380_220 Hb_000019_150--Hb_000025_030 Hb_001472_060 Hb_001472_060 Hb_000019_150--Hb_001472_060 Hb_000808_050 Hb_000808_050 Hb_000019_150--Hb_000808_050 Hb_004007_220 Hb_004007_220 Hb_000019_150--Hb_004007_220 Hb_010931_070 Hb_010931_070 Hb_000019_150--Hb_010931_070 Hb_000300_690 Hb_000300_690 Hb_000056_040--Hb_000300_690 Hb_004369_020 Hb_004369_020 Hb_000056_040--Hb_004369_020 Hb_004884_070 Hb_004884_070 Hb_000056_040--Hb_004884_070 Hb_001450_050 Hb_001450_050 Hb_000056_040--Hb_001450_050 Hb_000599_180 Hb_000599_180 Hb_000056_040--Hb_000599_180 Hb_001638_290 Hb_001638_290 Hb_000056_040--Hb_001638_290 Hb_007810_100 Hb_007810_100 Hb_000397_120--Hb_007810_100 Hb_013399_080 Hb_013399_080 Hb_000397_120--Hb_013399_080 Hb_003376_050 Hb_003376_050 Hb_000397_120--Hb_003376_050 Hb_000189_510 Hb_000189_510 Hb_000397_120--Hb_000189_510 Hb_000022_200 Hb_000022_200 Hb_000397_120--Hb_000022_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.08022 0.540981 1.86929 3.16023 1.83127 2.18103
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.383303 1.10516 3.92185 0.60914 1.41745

CAGE analysis