Hb_000189_510

Information

Type -
Description -
Location Contig189: 405149-408806
Sequence    

Annotation

kegg
ID rcu:RCOM_1428500
description kinase, putative (EC:2.7.11.25)
nr
ID XP_012089217.1
description PREDICTED: probable serine/threonine-protein kinase WNK9 [Jatropha curcas]
swissprot
ID Q9CAV6
description Serine/threonine-protein kinase WNK1 OS=Arabidopsis thaliana GN=WNK1 PE=1 SV=1
trembl
ID A0A067JI52
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23464 PE=4 SV=1
Gene Ontology
ID GO:0005622
description probable serine threonine-protein kinase wnk9

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_18702: 405388-408642
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000189_510 0.0 - - PREDICTED: probable serine/threonine-protein kinase WNK9 [Jatropha curcas]
2 Hb_002750_050 0.1173814519 - - Chromosome-associated kinesin KLP1, putative [Ricinus communis]
3 Hb_003376_050 0.1175800544 - - PREDICTED: protein IQ-DOMAIN 1-like [Jatropha curcas]
4 Hb_001266_140 0.1204495492 - - PREDICTED: protein RER1B [Jatropha curcas]
5 Hb_002942_060 0.1229275575 - - RNA-binding protein, putative [Ricinus communis]
6 Hb_002836_140 0.1235824597 - - PREDICTED: uncharacterized protein C1450.15 [Jatropha curcas]
7 Hb_000797_050 0.1312112134 - - PREDICTED: uncharacterized protein LOC105645916 [Jatropha curcas]
8 Hb_003430_090 0.1331581248 - - ATP binding protein, putative [Ricinus communis]
9 Hb_008556_030 0.136011352 - - PREDICTED: uncharacterized protein LOC105648021 isoform X1 [Jatropha curcas]
10 Hb_000392_370 0.1373852446 - - PREDICTED: protein IQ-DOMAIN 31-like [Jatropha curcas]
11 Hb_001486_170 0.1378864909 - - PREDICTED: syntaxin-132 [Jatropha curcas]
12 Hb_018954_020 0.138570818 - - PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH13 [Jatropha curcas]
13 Hb_000480_010 0.1392894106 - - conserved hypothetical protein [Ricinus communis]
14 Hb_007919_080 0.1409805888 - - PREDICTED: uncharacterized protein At1g76660 isoform X1 [Jatropha curcas]
15 Hb_058999_030 0.1434621214 - - PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1 [Jatropha curcas]
16 Hb_030827_030 0.143960976 - - PREDICTED: E3 ubiquitin-protein ligase XBAT33 [Jatropha curcas]
17 Hb_000208_260 0.1443746741 - - PREDICTED: acyl-CoA-binding domain-containing protein 4 [Jatropha curcas]
18 Hb_007810_100 0.1448148425 - - Synaptic glycoprotein SC2, putative [Ricinus communis]
19 Hb_013726_080 0.1451716075 - - Glycogen synthase kinase-3 beta, putative [Ricinus communis]
20 Hb_003549_090 0.1464708411 - - PREDICTED: rhodanese-like domain-containing protein 6 [Jatropha curcas]

Gene co-expression network

sample Hb_000189_510 Hb_000189_510 Hb_002750_050 Hb_002750_050 Hb_000189_510--Hb_002750_050 Hb_003376_050 Hb_003376_050 Hb_000189_510--Hb_003376_050 Hb_001266_140 Hb_001266_140 Hb_000189_510--Hb_001266_140 Hb_002942_060 Hb_002942_060 Hb_000189_510--Hb_002942_060 Hb_002836_140 Hb_002836_140 Hb_000189_510--Hb_002836_140 Hb_000797_050 Hb_000797_050 Hb_000189_510--Hb_000797_050 Hb_003430_090 Hb_003430_090 Hb_002750_050--Hb_003430_090 Hb_000392_370 Hb_000392_370 Hb_002750_050--Hb_000392_370 Hb_041290_010 Hb_041290_010 Hb_002750_050--Hb_041290_010 Hb_000207_190 Hb_000207_190 Hb_002750_050--Hb_000207_190 Hb_013726_080 Hb_013726_080 Hb_002750_050--Hb_013726_080 Hb_000915_110 Hb_000915_110 Hb_002750_050--Hb_000915_110 Hb_003376_050--Hb_002942_060 Hb_003376_050--Hb_000797_050 Hb_000606_080 Hb_000606_080 Hb_003376_050--Hb_000606_080 Hb_000649_050 Hb_000649_050 Hb_003376_050--Hb_000649_050 Hb_000197_210 Hb_000197_210 Hb_003376_050--Hb_000197_210 Hb_004375_130 Hb_004375_130 Hb_003376_050--Hb_004375_130 Hb_030827_030 Hb_030827_030 Hb_001266_140--Hb_030827_030 Hb_008556_030 Hb_008556_030 Hb_001266_140--Hb_008556_030 Hb_000567_360 Hb_000567_360 Hb_001266_140--Hb_000567_360 Hb_001266_140--Hb_000797_050 Hb_002681_170 Hb_002681_170 Hb_001266_140--Hb_002681_170 Hb_022693_030 Hb_022693_030 Hb_001266_140--Hb_022693_030 Hb_002398_030 Hb_002398_030 Hb_002942_060--Hb_002398_030 Hb_000445_050 Hb_000445_050 Hb_002942_060--Hb_000445_050 Hb_008120_030 Hb_008120_030 Hb_002942_060--Hb_008120_030 Hb_000208_260 Hb_000208_260 Hb_002942_060--Hb_000208_260 Hb_058999_030 Hb_058999_030 Hb_002942_060--Hb_058999_030 Hb_007592_030 Hb_007592_030 Hb_002942_060--Hb_007592_030 Hb_007951_040 Hb_007951_040 Hb_002836_140--Hb_007951_040 Hb_000915_080 Hb_000915_080 Hb_002836_140--Hb_000915_080 Hb_002836_140--Hb_008556_030 Hb_000414_050 Hb_000414_050 Hb_002836_140--Hb_000414_050 Hb_002783_170 Hb_002783_170 Hb_002836_140--Hb_002783_170 Hb_001486_170 Hb_001486_170 Hb_002836_140--Hb_001486_170 Hb_000797_050--Hb_008556_030 Hb_001444_010 Hb_001444_010 Hb_000797_050--Hb_001444_010 Hb_000480_010 Hb_000480_010 Hb_000797_050--Hb_000480_010 Hb_000679_130 Hb_000679_130 Hb_000797_050--Hb_000679_130 Hb_135377_010 Hb_135377_010 Hb_000797_050--Hb_135377_010 Hb_001983_030 Hb_001983_030 Hb_000797_050--Hb_001983_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.66458 2.15255 11.1578 7.96324 10.3838 16.6036
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.67999 2.43488 5.22008 3.42763 3.20082

CAGE analysis