Hb_000797_050

Information

Type -
Description -
Location Contig797: 62419-64852
Sequence    

Annotation

kegg
ID rcu:RCOM_1682330
description hypothetical protein
nr
ID XP_012087049.1
description PREDICTED: uncharacterized protein LOC105645916 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JZW9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20706 PE=4 SV=1
Gene Ontology
ID GO:0003824
description adenosine monophosphate-protein transferase and cysteine protease ibpa

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_58579: 55254-61693 , PASA_asmbl_58581: 55309-61504 , PASA_asmbl_58582: 62553-64723
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000797_050 0.0 - - PREDICTED: uncharacterized protein LOC105645916 [Jatropha curcas]
2 Hb_008556_030 0.0706895802 - - PREDICTED: uncharacterized protein LOC105648021 isoform X1 [Jatropha curcas]
3 Hb_001444_010 0.073708614 transcription factor TF Family: DDT PREDICTED: DDT domain-containing protein DDB_G0282237 isoform X1 [Jatropha curcas]
4 Hb_000480_010 0.0849534866 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000679_130 0.0852656868 - - dead box ATP-dependent RNA helicase, putative [Ricinus communis]
6 Hb_135377_010 0.0856500014 - - PREDICTED: pentatricopeptide repeat-containing protein At1g62930, chloroplastic-like, partial [Jatropha curcas]
7 Hb_001983_030 0.0885689891 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 12 isoform X2 [Jatropha curcas]
8 Hb_000367_130 0.0903049308 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000913_050 0.0957384082 - - hypothetical protein JCGZ_17329 [Jatropha curcas]
10 Hb_002749_110 0.0964949375 - - PREDICTED: uncharacterized protein LOC105636001 isoform X1 [Jatropha curcas]
11 Hb_003126_100 0.096716047 - - hypothetical protein POPTR_0005s11280g [Populus trichocarpa]
12 Hb_002836_140 0.0969807495 - - PREDICTED: uncharacterized protein C1450.15 [Jatropha curcas]
13 Hb_030131_040 0.0974397012 - - ribosome biogenesis protein tsr1, putative [Ricinus communis]
14 Hb_007044_040 0.0993501972 - - PREDICTED: uncharacterized protein LOC105646814 [Jatropha curcas]
15 Hb_003376_050 0.0993904461 - - PREDICTED: protein IQ-DOMAIN 1-like [Jatropha curcas]
16 Hb_001599_030 0.0996690119 - - PREDICTED: valine--tRNA ligase [Jatropha curcas]
17 Hb_003549_090 0.0999039486 - - PREDICTED: rhodanese-like domain-containing protein 6 [Jatropha curcas]
18 Hb_007262_020 0.1002352275 - - PREDICTED: protein AUXIN SIGNALING F-BOX 2-like [Jatropha curcas]
19 Hb_002942_060 0.1003595865 - - RNA-binding protein, putative [Ricinus communis]
20 Hb_000028_610 0.1009764109 - - PREDICTED: uncharacterized protein LOC105644291 [Jatropha curcas]

Gene co-expression network

sample Hb_000797_050 Hb_000797_050 Hb_008556_030 Hb_008556_030 Hb_000797_050--Hb_008556_030 Hb_001444_010 Hb_001444_010 Hb_000797_050--Hb_001444_010 Hb_000480_010 Hb_000480_010 Hb_000797_050--Hb_000480_010 Hb_000679_130 Hb_000679_130 Hb_000797_050--Hb_000679_130 Hb_135377_010 Hb_135377_010 Hb_000797_050--Hb_135377_010 Hb_001983_030 Hb_001983_030 Hb_000797_050--Hb_001983_030 Hb_002836_140 Hb_002836_140 Hb_008556_030--Hb_002836_140 Hb_001418_040 Hb_001418_040 Hb_008556_030--Hb_001418_040 Hb_002942_050 Hb_002942_050 Hb_008556_030--Hb_002942_050 Hb_000031_280 Hb_000031_280 Hb_008556_030--Hb_000031_280 Hb_002093_030 Hb_002093_030 Hb_008556_030--Hb_002093_030 Hb_000025_110 Hb_000025_110 Hb_001444_010--Hb_000025_110 Hb_000618_030 Hb_000618_030 Hb_001444_010--Hb_000618_030 Hb_000913_050 Hb_000913_050 Hb_001444_010--Hb_000913_050 Hb_001444_010--Hb_000679_130 Hb_004994_040 Hb_004994_040 Hb_001444_010--Hb_004994_040 Hb_003126_100 Hb_003126_100 Hb_000480_010--Hb_003126_100 Hb_001102_080 Hb_001102_080 Hb_000480_010--Hb_001102_080 Hb_002888_070 Hb_002888_070 Hb_000480_010--Hb_002888_070 Hb_001341_120 Hb_001341_120 Hb_000480_010--Hb_001341_120 Hb_000868_060 Hb_000868_060 Hb_000480_010--Hb_000868_060 Hb_007044_040 Hb_007044_040 Hb_000480_010--Hb_007044_040 Hb_000679_130--Hb_000025_110 Hb_000367_130 Hb_000367_130 Hb_000679_130--Hb_000367_130 Hb_001599_030 Hb_001599_030 Hb_000679_130--Hb_001599_030 Hb_007262_020 Hb_007262_020 Hb_000679_130--Hb_007262_020 Hb_006915_060 Hb_006915_060 Hb_000679_130--Hb_006915_060 Hb_001105_010 Hb_001105_010 Hb_135377_010--Hb_001105_010 Hb_007026_030 Hb_007026_030 Hb_135377_010--Hb_007026_030 Hb_135377_010--Hb_001983_030 Hb_178968_100 Hb_178968_100 Hb_135377_010--Hb_178968_100 Hb_135377_010--Hb_001102_080 Hb_001983_030--Hb_000913_050 Hb_001983_030--Hb_000367_130 Hb_002918_030 Hb_002918_030 Hb_001983_030--Hb_002918_030 Hb_001983_030--Hb_178968_100 Hb_003044_100 Hb_003044_100 Hb_001983_030--Hb_003044_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
26.4308 6.19058 13.9637 13.2933 22.0881 28.4389
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
10.0632 8.76676 9.60701 9.7546 11.6368

CAGE analysis