Hb_007044_040

Information

Type -
Description -
Location Contig7044: 13225-16311
Sequence    

Annotation

kegg
ID rcu:RCOM_0016820
description hypothetical protein
nr
ID XP_012088144.1
description PREDICTED: uncharacterized protein LOC105646814 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JK50
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25657 PE=4 SV=1
Gene Ontology
ID GO:0005622
description tax1-binding protein 1 homolog b-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_55001: 13154-16073 , PASA_asmbl_55002: 15760-16339
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007044_040 0.0 - - PREDICTED: uncharacterized protein LOC105646814 [Jatropha curcas]
2 Hb_001102_080 0.0697057161 - - PREDICTED: anaphase-promoting complex subunit 4 [Jatropha curcas]
3 Hb_003126_100 0.079235678 - - hypothetical protein POPTR_0005s11280g [Populus trichocarpa]
4 Hb_002093_030 0.0792851 - - PREDICTED: uncharacterized protein LOC105648523 [Jatropha curcas]
5 Hb_000480_010 0.0795308918 - - conserved hypothetical protein [Ricinus communis]
6 Hb_011915_010 0.0845464718 - - PREDICTED: nucleobase-ascorbate transporter 12 [Jatropha curcas]
7 Hb_002888_070 0.0871444855 - - PREDICTED: tubulin-folding cofactor E isoform X1 [Pyrus x bretschneideri]
8 Hb_000189_330 0.0872163311 - - PREDICTED: ER membrane protein complex subunit 2 [Jatropha curcas]
9 Hb_001983_030 0.0876031036 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 12 isoform X2 [Jatropha curcas]
10 Hb_008556_030 0.0890779647 - - PREDICTED: uncharacterized protein LOC105648021 isoform X1 [Jatropha curcas]
11 Hb_001040_040 0.0924039827 - - Uncharacterized protein TCM_029905 [Theobroma cacao]
12 Hb_001427_190 0.0949072186 - - PREDICTED: histone acetyltransferase type B catalytic subunit [Jatropha curcas]
13 Hb_000395_020 0.0952774756 - - PREDICTED: ankyrin repeat and KH domain-containing protein R11A8.7 [Jatropha curcas]
14 Hb_000913_050 0.0957843235 - - hypothetical protein JCGZ_17329 [Jatropha curcas]
15 Hb_027472_120 0.0957955356 - - PREDICTED: thiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial isoform X1 [Jatropha curcas]
16 Hb_030827_030 0.0964912901 - - PREDICTED: E3 ubiquitin-protein ligase XBAT33 [Jatropha curcas]
17 Hb_004951_070 0.099012353 desease resistance Gene Name: AAA Stage III sporulation protein AA, putative [Ricinus communis]
18 Hb_000797_050 0.0993501972 - - PREDICTED: uncharacterized protein LOC105645916 [Jatropha curcas]
19 Hb_000868_060 0.101002263 - - PREDICTED: conserved oligomeric Golgi complex subunit 3 [Jatropha curcas]
20 Hb_135377_010 0.1012407885 - - PREDICTED: pentatricopeptide repeat-containing protein At1g62930, chloroplastic-like, partial [Jatropha curcas]

Gene co-expression network

sample Hb_007044_040 Hb_007044_040 Hb_001102_080 Hb_001102_080 Hb_007044_040--Hb_001102_080 Hb_003126_100 Hb_003126_100 Hb_007044_040--Hb_003126_100 Hb_002093_030 Hb_002093_030 Hb_007044_040--Hb_002093_030 Hb_000480_010 Hb_000480_010 Hb_007044_040--Hb_000480_010 Hb_011915_010 Hb_011915_010 Hb_007044_040--Hb_011915_010 Hb_002888_070 Hb_002888_070 Hb_007044_040--Hb_002888_070 Hb_001102_080--Hb_000480_010 Hb_001102_080--Hb_002888_070 Hb_000868_060 Hb_000868_060 Hb_001102_080--Hb_000868_060 Hb_000270_460 Hb_000270_460 Hb_001102_080--Hb_000270_460 Hb_018790_070 Hb_018790_070 Hb_001102_080--Hb_018790_070 Hb_003126_100--Hb_002888_070 Hb_003126_100--Hb_000480_010 Hb_000002_490 Hb_000002_490 Hb_003126_100--Hb_000002_490 Hb_002749_110 Hb_002749_110 Hb_003126_100--Hb_002749_110 Hb_000914_080 Hb_000914_080 Hb_003126_100--Hb_000914_080 Hb_003126_100--Hb_002093_030 Hb_002093_030--Hb_002749_110 Hb_022693_030 Hb_022693_030 Hb_002093_030--Hb_022693_030 Hb_000152_260 Hb_000152_260 Hb_002093_030--Hb_000152_260 Hb_008556_030 Hb_008556_030 Hb_002093_030--Hb_008556_030 Hb_001828_160 Hb_001828_160 Hb_002093_030--Hb_001828_160 Hb_000480_010--Hb_002888_070 Hb_001341_120 Hb_001341_120 Hb_000480_010--Hb_001341_120 Hb_000480_010--Hb_000868_060 Hb_001040_040 Hb_001040_040 Hb_011915_010--Hb_001040_040 Hb_001050_010 Hb_001050_010 Hb_011915_010--Hb_001050_010 Hb_002249_160 Hb_002249_160 Hb_011915_010--Hb_002249_160 Hb_011609_170 Hb_011609_170 Hb_011915_010--Hb_011609_170 Hb_001198_150 Hb_001198_150 Hb_011915_010--Hb_001198_150 Hb_002888_070--Hb_000868_060 Hb_002888_070--Hb_000914_080 Hb_011930_080 Hb_011930_080 Hb_002888_070--Hb_011930_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
32.6767 9.22063 27.5098 10.855 35.6734 30.3909
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
16.6127 10.9834 11.3475 16.2146 13.7871

CAGE analysis