Hb_187953_010

Information

Type -
Description -
Location Contig187953: 3736-5387
Sequence    

Annotation

kegg
ID rcu:RCOM_1076710
description type II inositol 5-phosphatase, putative (EC:3.1.3.36)
nr
ID XP_012078911.1
description PREDICTED: type II inositol 1,4,5-trisphosphate 5-phosphatase FRA3 isoform X2 [Jatropha curcas]
swissprot
ID Q84W55
description Type II inositol 1,4,5-trisphosphate 5-phosphatase FRA3 OS=Arabidopsis thaliana GN=FRA3 PE=1 SV=2
trembl
ID A0A067KBT0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13413 PE=4 SV=1
Gene Ontology
ID GO:0005515
description type ii inositol -trisphosphate 5-phosphatase fra3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_18537: 4020-5342
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_187953_010 0.0 - - PREDICTED: type II inositol 1,4,5-trisphosphate 5-phosphatase FRA3 isoform X2 [Jatropha curcas]
2 Hb_012322_010 0.0701610835 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
3 Hb_000140_210 0.099700106 - - sec10, putative [Ricinus communis]
4 Hb_000718_080 0.1012976493 - - hypothetical protein PRUPE_ppa005259mg [Prunus persica]
5 Hb_085781_020 0.1054774428 - - PREDICTED: extra-large guanine nucleotide-binding protein 1 [Jatropha curcas]
6 Hb_000236_310 0.1078789619 - - PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Malus domestica]
7 Hb_001195_470 0.1089850605 - - PREDICTED: uncharacterized membrane protein At1g75140 [Jatropha curcas]
8 Hb_000809_230 0.1113162938 - - PREDICTED: uncharacterized protein LOC105639681 isoform X1 [Jatropha curcas]
9 Hb_002414_060 0.1118386462 - - hypothetical protein EUGRSUZ_E01310 [Eucalyptus grandis]
10 Hb_000723_220 0.1121977452 - - PREDICTED: uncharacterized protein LOC105642234 [Jatropha curcas]
11 Hb_003544_050 0.1129338852 - - PREDICTED: uncharacterized protein LOC105644300 isoform X1 [Jatropha curcas]
12 Hb_004224_020 0.1138796861 - - PREDICTED: uncharacterized protein LOC105643786 [Jatropha curcas]
13 Hb_000192_080 0.1149256941 - - PREDICTED: serine/threonine-protein kinase SAPK3 isoform X1 [Jatropha curcas]
14 Hb_000174_180 0.1149798277 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
15 Hb_000028_390 0.1151924557 - - PREDICTED: extra-large guanine nucleotide-binding protein 3-like [Jatropha curcas]
16 Hb_000429_150 0.1181550172 - - hypothetical protein JCGZ_06799 [Jatropha curcas]
17 Hb_000212_380 0.1184126408 - - Aspartic proteinase Asp1 precursor, putative [Ricinus communis]
18 Hb_009296_040 0.1189347374 - - hypothetical protein L484_007435 [Morus notabilis]
19 Hb_007803_050 0.1189678064 - - PREDICTED: uncharacterized protein LOC105129170 isoform X2 [Populus euphratica]
20 Hb_028912_040 0.1194872107 - - hypothetical protein POPTR_0016s03250g [Populus trichocarpa]

Gene co-expression network

sample Hb_187953_010 Hb_187953_010 Hb_012322_010 Hb_012322_010 Hb_187953_010--Hb_012322_010 Hb_000140_210 Hb_000140_210 Hb_187953_010--Hb_000140_210 Hb_000718_080 Hb_000718_080 Hb_187953_010--Hb_000718_080 Hb_085781_020 Hb_085781_020 Hb_187953_010--Hb_085781_020 Hb_000236_310 Hb_000236_310 Hb_187953_010--Hb_000236_310 Hb_001195_470 Hb_001195_470 Hb_187953_010--Hb_001195_470 Hb_000192_080 Hb_000192_080 Hb_012322_010--Hb_000192_080 Hb_007638_030 Hb_007638_030 Hb_012322_010--Hb_007638_030 Hb_000212_380 Hb_000212_380 Hb_012322_010--Hb_000212_380 Hb_000429_150 Hb_000429_150 Hb_012322_010--Hb_000429_150 Hb_000140_280 Hb_000140_280 Hb_012322_010--Hb_000140_280 Hb_003544_050 Hb_003544_050 Hb_000140_210--Hb_003544_050 Hb_009296_040 Hb_009296_040 Hb_000140_210--Hb_009296_040 Hb_011016_050 Hb_011016_050 Hb_000140_210--Hb_011016_050 Hb_000066_170 Hb_000066_170 Hb_000140_210--Hb_000066_170 Hb_000140_210--Hb_085781_020 Hb_000028_390 Hb_000028_390 Hb_000140_210--Hb_000028_390 Hb_000784_070 Hb_000784_070 Hb_000718_080--Hb_000784_070 Hb_032050_040 Hb_032050_040 Hb_000718_080--Hb_032050_040 Hb_000718_080--Hb_012322_010 Hb_000718_080--Hb_000429_150 Hb_000830_030 Hb_000830_030 Hb_000718_080--Hb_000830_030 Hb_152202_010 Hb_152202_010 Hb_000718_080--Hb_152202_010 Hb_071130_010 Hb_071130_010 Hb_085781_020--Hb_071130_010 Hb_000230_260 Hb_000230_260 Hb_085781_020--Hb_000230_260 Hb_085781_020--Hb_000066_170 Hb_003060_060 Hb_003060_060 Hb_085781_020--Hb_003060_060 Hb_002639_080 Hb_002639_080 Hb_085781_020--Hb_002639_080 Hb_005228_130 Hb_005228_130 Hb_000236_310--Hb_005228_130 Hb_001449_040 Hb_001449_040 Hb_000236_310--Hb_001449_040 Hb_000613_050 Hb_000613_050 Hb_000236_310--Hb_000613_050 Hb_011716_020 Hb_011716_020 Hb_000236_310--Hb_011716_020 Hb_000127_040 Hb_000127_040 Hb_000236_310--Hb_000127_040 Hb_002600_140 Hb_002600_140 Hb_000236_310--Hb_002600_140 Hb_000723_220 Hb_000723_220 Hb_001195_470--Hb_000723_220 Hb_004019_120 Hb_004019_120 Hb_001195_470--Hb_004019_120 Hb_000680_110 Hb_000680_110 Hb_001195_470--Hb_000680_110 Hb_003417_010 Hb_003417_010 Hb_001195_470--Hb_003417_010 Hb_001821_150 Hb_001821_150 Hb_001195_470--Hb_001821_150 Hb_004531_120 Hb_004531_120 Hb_001195_470--Hb_004531_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.46475 5.15293 2.33977 9.56338 3.96053 12.1369
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.51062 3.09821 7.40689 7.85607 7.87888

CAGE analysis