Hb_158092_030

Information

Type -
Description -
Location Contig158092: 11917-14872
Sequence    

Annotation

kegg
ID rcu:RCOM_1438470
description fk506-binding protein, putative
nr
ID XP_012088707.1
description PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP19, chloroplastic [Jatropha curcas]
swissprot
ID Q9LYR5
description Peptidyl-prolyl cis-trans isomerase FKBP19, chloroplastic OS=Arabidopsis thaliana GN=FKBP19 PE=1 SV=1
trembl
ID A0A067JUR3
description Peptidyl-prolyl cis-trans isomerase OS=Jatropha curcas GN=JCGZ_23087 PE=4 SV=1
Gene Ontology
ID GO:0009535
description peptidyl-prolyl cis-trans isomerase chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_13913: 11902-14702
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_158092_030 0.0 - - PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP19, chloroplastic [Jatropha curcas]
2 Hb_005276_130 0.0805423549 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000031_090 0.124473927 - - PREDICTED: pentatricopeptide repeat-containing protein At5g10690 [Jatropha curcas]
4 Hb_029695_110 0.125824649 - - hypothetical protein CICLE_v10021605mg [Citrus clementina]
5 Hb_003752_070 0.1331979729 - - PREDICTED: uncharacterized protein LOC105643912 isoform X1 [Jatropha curcas]
6 Hb_000228_090 0.1355932387 - - PREDICTED: protein PAM68, chloroplastic [Jatropha curcas]
7 Hb_000051_060 0.1358707421 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000920_030 0.1383683725 - - short chain alcohol dehydrogenase, putative [Ricinus communis]
9 Hb_032202_180 0.1422224203 - - PREDICTED: protein-ribulosamine 3-kinase, chloroplastic [Jatropha curcas]
10 Hb_000441_060 0.1444572863 - - PREDICTED: glycolipid transfer protein [Jatropha curcas]
11 Hb_000300_670 0.147111257 - - PREDICTED: uncharacterized protein LOC105632624 isoform X1 [Jatropha curcas]
12 Hb_003861_070 0.1475083563 - - PREDICTED: uncharacterized protein LOC105650781 [Jatropha curcas]
13 Hb_000175_590 0.1477473928 - - PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic [Jatropha curcas]
14 Hb_011310_140 0.147963196 - - hypothetical protein JCGZ_07173 [Jatropha curcas]
15 Hb_003029_070 0.1494822487 - - PREDICTED: beta-carotene isomerase D27, chloroplastic isoform X1 [Jatropha curcas]
16 Hb_001195_270 0.1495260923 - - PREDICTED: 5'-nucleotidase domain-containing protein 4 isoform X1 [Jatropha curcas]
17 Hb_005389_170 0.149899798 - - PREDICTED: probable lactoylglutathione lyase, chloroplast isoform X1 [Jatropha curcas]
18 Hb_000723_100 0.1534430041 - - phosphoglycerate kinase, putative [Ricinus communis]
19 Hb_001935_100 0.1542163034 - - structural molecule, putative [Ricinus communis]
20 Hb_001232_150 0.155176357 - - PREDICTED: MAR-binding filament-like protein 1-1 [Jatropha curcas]

Gene co-expression network

sample Hb_158092_030 Hb_158092_030 Hb_005276_130 Hb_005276_130 Hb_158092_030--Hb_005276_130 Hb_000031_090 Hb_000031_090 Hb_158092_030--Hb_000031_090 Hb_029695_110 Hb_029695_110 Hb_158092_030--Hb_029695_110 Hb_003752_070 Hb_003752_070 Hb_158092_030--Hb_003752_070 Hb_000228_090 Hb_000228_090 Hb_158092_030--Hb_000228_090 Hb_000051_060 Hb_000051_060 Hb_158092_030--Hb_000051_060 Hb_000175_590 Hb_000175_590 Hb_005276_130--Hb_000175_590 Hb_005276_130--Hb_003752_070 Hb_001232_150 Hb_001232_150 Hb_005276_130--Hb_001232_150 Hb_021650_010 Hb_021650_010 Hb_005276_130--Hb_021650_010 Hb_005527_010 Hb_005527_010 Hb_005276_130--Hb_005527_010 Hb_000723_100 Hb_000723_100 Hb_000031_090--Hb_000723_100 Hb_005433_010 Hb_005433_010 Hb_000031_090--Hb_005433_010 Hb_000031_090--Hb_029695_110 Hb_001097_100 Hb_001097_100 Hb_000031_090--Hb_001097_100 Hb_000031_090--Hb_005276_130 Hb_000920_030 Hb_000920_030 Hb_029695_110--Hb_000920_030 Hb_001205_300 Hb_001205_300 Hb_029695_110--Hb_001205_300 Hb_000959_030 Hb_000959_030 Hb_029695_110--Hb_000959_030 Hb_003462_070 Hb_003462_070 Hb_029695_110--Hb_003462_070 Hb_002304_080 Hb_002304_080 Hb_029695_110--Hb_002304_080 Hb_029695_110--Hb_000723_100 Hb_003752_070--Hb_021650_010 Hb_001195_270 Hb_001195_270 Hb_003752_070--Hb_001195_270 Hb_006787_090 Hb_006787_090 Hb_003752_070--Hb_006787_090 Hb_005162_110 Hb_005162_110 Hb_003752_070--Hb_005162_110 Hb_003752_070--Hb_000051_060 Hb_010174_090 Hb_010174_090 Hb_003752_070--Hb_010174_090 Hb_000228_090--Hb_001097_100 Hb_000228_090--Hb_029695_110 Hb_032202_180 Hb_032202_180 Hb_000228_090--Hb_032202_180 Hb_000228_090--Hb_000031_090 Hb_007313_090 Hb_007313_090 Hb_000228_090--Hb_007313_090 Hb_001935_100 Hb_001935_100 Hb_000051_060--Hb_001935_100 Hb_000051_060--Hb_005162_110 Hb_000051_060--Hb_021650_010 Hb_002876_220 Hb_002876_220 Hb_000051_060--Hb_002876_220 Hb_000051_060--Hb_001232_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
13.0986 5.66694 25.0491 5.58317 16.7249 11.9901
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
13.7182 11.9162 2.68741 2.20231 22.7846

CAGE analysis