Hb_005527_010

Information

Type -
Description -
Location Contig5527: 7063-10542
Sequence    

Annotation

kegg
ID rcu:RCOM_1614410
description cell division protein ftsy, putative
nr
ID XP_012083458.1
description PREDICTED: cell division protein FtsY homolog, chloroplastic isoform X1 [Jatropha curcas]
swissprot
ID O80842
description Cell division protein FtsY homolog, chloroplastic OS=Arabidopsis thaliana GN=CPFTSY PE=1 SV=2
trembl
ID A0A067K8T0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14446 PE=4 SV=1
Gene Ontology
ID GO:0005622
description cell division protein chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005527_010 0.0 - - PREDICTED: cell division protein FtsY homolog, chloroplastic isoform X1 [Jatropha curcas]
2 Hb_000061_150 0.1086597551 - - PREDICTED: ribulose-phosphate 3-epimerase, chloroplastic [Jatropha curcas]
3 Hb_000694_030 0.1168385371 - - PREDICTED: nucleobase-ascorbate transporter 1 [Jatropha curcas]
4 Hb_011310_140 0.1260913614 - - hypothetical protein JCGZ_07173 [Jatropha curcas]
5 Hb_002701_120 0.1268283076 - - PREDICTED: uncharacterized protein LOC105646751 [Jatropha curcas]
6 Hb_005276_130 0.1268561305 - - conserved hypothetical protein [Ricinus communis]
7 Hb_066967_020 0.1276040505 - - RAB6-interacting protein, putative [Ricinus communis]
8 Hb_021650_010 0.1294101779 - - hypothetical protein JCGZ_09648 [Jatropha curcas]
9 Hb_001232_150 0.1352367103 - - PREDICTED: MAR-binding filament-like protein 1-1 [Jatropha curcas]
10 Hb_000284_130 0.1398141703 - - sodium-bile acid cotransporter, putative [Ricinus communis]
11 Hb_007594_040 0.1452304985 - - calcium lipid binding protein, putative [Ricinus communis]
12 Hb_003304_030 0.1452748878 - - PREDICTED: uroporphyrinogen-III synthase, chloroplastic isoform X2 [Jatropha curcas]
13 Hb_000051_060 0.1473422023 - - conserved hypothetical protein [Ricinus communis]
14 Hb_003752_070 0.1493665832 - - PREDICTED: uncharacterized protein LOC105643912 isoform X1 [Jatropha curcas]
15 Hb_000194_010 0.1528418463 - - omega-6 fatty acid desaturase, chloroplastic [Jatropha curcas]
16 Hb_029142_030 0.1530588126 rubber biosynthesis Gene Name: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Hevea brasiliensis]
17 Hb_001959_240 0.1555408811 - - PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial [Jatropha curcas]
18 Hb_004994_080 0.1565894196 - - PREDICTED: cell division protein FtsY homolog, chloroplastic isoform X1 [Jatropha curcas]
19 Hb_032202_180 0.1576093094 - - PREDICTED: protein-ribulosamine 3-kinase, chloroplastic [Jatropha curcas]
20 Hb_005389_170 0.157871568 - - PREDICTED: probable lactoylglutathione lyase, chloroplast isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_005527_010 Hb_005527_010 Hb_000061_150 Hb_000061_150 Hb_005527_010--Hb_000061_150 Hb_000694_030 Hb_000694_030 Hb_005527_010--Hb_000694_030 Hb_011310_140 Hb_011310_140 Hb_005527_010--Hb_011310_140 Hb_002701_120 Hb_002701_120 Hb_005527_010--Hb_002701_120 Hb_005276_130 Hb_005276_130 Hb_005527_010--Hb_005276_130 Hb_066967_020 Hb_066967_020 Hb_005527_010--Hb_066967_020 Hb_000194_010 Hb_000194_010 Hb_000061_150--Hb_000194_010 Hb_007594_040 Hb_007594_040 Hb_000061_150--Hb_007594_040 Hb_002044_020 Hb_002044_020 Hb_000061_150--Hb_002044_020 Hb_006846_070 Hb_006846_070 Hb_000061_150--Hb_006846_070 Hb_001454_150 Hb_001454_150 Hb_000061_150--Hb_001454_150 Hb_000694_030--Hb_066967_020 Hb_006618_070 Hb_006618_070 Hb_000694_030--Hb_006618_070 Hb_000694_030--Hb_002701_120 Hb_001959_240 Hb_001959_240 Hb_000694_030--Hb_001959_240 Hb_029142_030 Hb_029142_030 Hb_000694_030--Hb_029142_030 Hb_000976_190 Hb_000976_190 Hb_011310_140--Hb_000976_190 Hb_003304_030 Hb_003304_030 Hb_011310_140--Hb_003304_030 Hb_006787_090 Hb_006787_090 Hb_011310_140--Hb_006787_090 Hb_002997_070 Hb_002997_070 Hb_011310_140--Hb_002997_070 Hb_011310_140--Hb_000194_010 Hb_021650_010 Hb_021650_010 Hb_011310_140--Hb_021650_010 Hb_002701_120--Hb_006618_070 Hb_002701_120--Hb_011310_140 Hb_000284_130 Hb_000284_130 Hb_002701_120--Hb_000284_130 Hb_005038_030 Hb_005038_030 Hb_002701_120--Hb_005038_030 Hb_158092_030 Hb_158092_030 Hb_005276_130--Hb_158092_030 Hb_000175_590 Hb_000175_590 Hb_005276_130--Hb_000175_590 Hb_003752_070 Hb_003752_070 Hb_005276_130--Hb_003752_070 Hb_001232_150 Hb_001232_150 Hb_005276_130--Hb_001232_150 Hb_005276_130--Hb_021650_010 Hb_066967_020--Hb_021650_010 Hb_006555_040 Hb_006555_040 Hb_066967_020--Hb_006555_040 Hb_066967_020--Hb_001232_150 Hb_066967_020--Hb_029142_030 Hb_000140_440 Hb_000140_440 Hb_066967_020--Hb_000140_440
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.81636 0.412213 8.99107 1.4235 3.40492 3.06611
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.88924 1.82937 1.29186 1.28593 5.80316

CAGE analysis